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Name : hsdM3 (NTHI1838) Accession : YP_249266.1 Strain : Haemophilus influenzae 86-028NP Genome accession: NC_007146 Putative virulence/resistance : Unknown Product : type I restriction enzyme HindVIIP M protein Function : - COG functional category : V : Defense mechanisms COG ID : COG0286 EC number : 2.1.1.72 Position : 1690210 - 1691880 bp Length : 1671 bp Strand : + Note : M.HindVIIP; Similar to: HI1287, T1MH_HAEIN DNA sequence : ATGCAAGCGAGACGAGACACCAAGATTGTCGATGAAAATCACACATTACAACAAGCATTTTTAAACGATTTAGACGAAAA ACTTTGGTCATCTGCGGATAAACTCCGCCAACAACTTGATGCCGCCAACTATAAACATATCGTTCTTGGTCTCATCTTCT TAAAATACATTTCTGATAATTTCACTCATCAACAGGAAAAAATTCAGGCAGAACTTTCTGATGCTGAAAATCCCCTCTAT CTTGACCGCACTTTTTTTGATACTGAAGAAGAATATCAAGAAGCTTTAACCGCAGAACTAGAAAACCGTGATTATTACAC CGCGGATAACGTATTTTGGGTGCCCGCTTCTGCACGTTGGCAAGCCTTACAAGAAGTCTCTATTCTCAACACTGGTGCAG AATTACCTTGGGGTGGTAAATTCTCAGGCGTGGCAAAACTGATTGATGATGCCTTTGATGCCATTGAAAAAGACAACGAA AAACTCAAAGGCGTCCTCCAACGCATCAGCGGCTATGCCGTAAACGAAGACACCCTGCGCGGGCTGATTATCCTCTTCTC CGATACTAACTTTACCCGCCCGACTTACAACGGCGAGCCCGTACATTTAGGTGCAAAAGACATACTCGGCCATGTTTACG AATACTTCCTCGGTCGCTTTGCCCAAGCCGAAGGCAAACGCGGCGGGCAATATTTCACGCCGAAATCCATCGTTTCCCTG ATTGTCGAAATGCTCGAGCCATACTCCGGCCGCGTGTATGACCCAGCTATGGGCAGTGGCGGCTTTTTCGTGCAAACCGA ACGCTTTATTACCGCCCATCAAGGCAACATCAACAACGTGTCCATCTACGGGCAAGAATTCAACCCCACCACATGGAAGC TCGCCGCCATGAATATGGCGATTCGCGGCATTGATTACGACTTCGGCAAACACAACGCCGACAGTTTCACCCAGCCGCAA CACATCGACAAAAAGATGGATTTCATTATGGCAAACCCGCCATTCAATATCAGCGATTGGTGGAGCGAATCCCTTGCCGA TGATCCACGTTGGGCATACGGCACACCACCCAAAGGCAACGCCAACTTCGCTTGGCTGCAACACATGATTTACCACCTCT CACCCAACGGCAAAATGGCATTATTGCTTGCCAACGGCTCCATGAGCAGCCAAACCAACAACGAAGGCGAAATCCGCAAA GCCATCATCAATGCCGACTTGGTCGAATGTATGGTTGCCCTGCCCGGTCAGCTCTTCACCAACACCCAAATCCCTGCCTG TATTTGGTTTTTAAACCGCAACAAAAAACGCAAAGGCGAAGTGTTGTTTATCGATGCCCGCCAAATCGGCTATATGAAAG ACCGCGTATTGCGTGATTTCACCGCTGACGACATCGCCAAAATTGCCGACACCCTCCACACTTGGCAAAAATCAGACGGC TATGAAGACCAAGCCGCTTTCTGTAAATCCGCTACGTTAGAAGAGATTAAAGACAACGACTTCGTCCTCACACCAGGGCG CTATGTCGGCACCGCAGAACAAGAAGATGACGGCGTGCCATTTGCAGAAAAAATGCAAAATCTGACCGCTCTTTTGAAGG AGCAATTTGCGAAAAGTGCGGAATTGGAAGCAGAAATTAAGAAGAATTTAGGGGGATTGGGGTATGAGTAA Protein sequence : MQARRDTKIVDENHTLQQAFLNDLDEKLWSSADKLRQQLDAANYKHIVLGLIFLKYISDNFTHQQEKIQAELSDAENPLY LDRTFFDTEEEYQEALTAELENRDYYTADNVFWVPASARWQALQEVSILNTGAELPWGGKFSGVAKLIDDAFDAIEKDNE KLKGVLQRISGYAVNEDTLRGLIILFSDTNFTRPTYNGEPVHLGAKDILGHVYEYFLGRFAQAEGKRGGQYFTPKSIVSL IVEMLEPYSGRVYDPAMGSGGFFVQTERFITAHQGNINNVSIYGQEFNPTTWKLAAMNMAIRGIDYDFGKHNADSFTQPQ HIDKKMDFIMANPPFNISDWWSESLADDPRWAYGTPPKGNANFAWLQHMIYHLSPNGKMALLLANGSMSSQTNNEGEIRK AIINADLVECMVALPGQLFTNTQIPACIWFLNRNKKRKGEVLFIDARQIGYMKDRVLRDFTADDIAKIADTLHTWQKSDG YEDQAAFCKSATLEEIKDNDFVLTPGRYVGTAEQEDDGVPFAEKMQNLTALLKEQFAKSAELEAEIKKNLGGLGYE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api49 | CAF28523.1 | putative HsdM-like N-methyl transferase | Not tested | YAPI | Protein | 1e-176 | 64 |
| hsdM | YP_251979.1 | type I restriction-modification system DNA methylase | Not tested | SCCmec | Protein | 2e-127 | 50 |
| hsdM | BAH57701.1 | type I restriction-modification system DNA methylase | Not tested | Type-VII SCCmec | Protein | 2e-127 | 50 |
| hsdM | BAD24842.1 | HsdM protein | Not tested | Type-V SCCmec | Protein | 5e-125 | 49 |
