Gene Information

Name : dnaB (NTHI1477)
Accession : YP_248952.1
Strain : Haemophilus influenzae 86-028NP
Genome accession: NC_007146
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0305
EC number : 3.6.1.-
Position : 1404973 - 1406487 bp
Length : 1515 bp
Strand : -
Note : unwinds double stranded DNA

DNA sequence :
GTGGATTTTTCCACCGTTTTTTATTTCCTTTTTTCACCGCACTTTTCACTTAAATCCAATAGATATTTGCGGTATCATAG
GCGACATTCTAGTATCGAAATAAGTCCTATGGCATCACAACCTCAAATCAAATCTTCAGACAAAAAAACAGCACAAGTTA
GCATTCCTCCGCACTCAATTGAGGCTGAACAAGCCGTGTTGGGTGGCATCATGCTGAGCAATCAACATTGGGATGGCATT
GCTGAACGTGTGATTGCTGACGATTTTTATACTTTTCAGCATCGTCTAATTTTTACAGAAATGGAACATCTAATGCGTAA
TCAATCGCCTATTGATTTAATTACGCTAGATCAAGCCTTAAGAAGCCACGGTGTCAGCGATGAAGTAGGTGGATTTGCCT
ATCTAGCAGAGCTTTCTAATAATACTCCGAACGCGATTAATATTTTGGCTTATGCAGATATTGTGCGTGAGAAAGCCATA
TTACGAGAACTTATTTCGGTAGGAAATCGCATTGCTGAAAATAGCTATTCTCCTAAAGGGCAAGACATTAAGTTAATTCT
TGATGAGGCTGAGCGTGAAGTATTTGCGATTGCAGAAAAACGAACAACTTCTAGCGAAGGCCCACAAAATGTGATCAATG
TGCTAGAAAGTACCATTGAAAAAATCGATATTTTAAGCAAACTTGAAAATCATTCAGGTGTAACAGGTGTTACGACGGGC
TTTACCGATCTTGATAAAAAAACGGCTGGTTTACAACCTTCAGACTTAATTATCGTTGCGGCACGTCCGTCAATGGGTAA
AACCACTTTCGCCATGAACCTTTGCGAAAATGCCGCAATGGCAAGTGAAAAACCCGTTTTAGTATTTAGTTTAGAAATGC
CAGCAGAACAAATTATGATGCGTATGATCGCATCGCTTGCTCGCGTTGATCAAACTAAAATCCGAACAGGTCAAAATTTA
GATGAAATCGAGTGGAATAAAATTGCTAGCGTAGTGGGAATGTTCAAGCAAAAAAATAATCTTTTTATCGATGATTCTTC
AGGTCTAACACCTACCGATGTTCGTTCGCGCGCACGCCGAGTTTATCGTGAAAATGGTGGATTAAGTATGATTATGGTGG
ATTATTTGCAATTAATGCGCGCACCCGCATTTTCAGATAACCGAACACTAGAAATCGCAGAAATTTCTCGTTCCCTCAAA
GCACTCGCCAAAGAATTACAAGTGCCAGTAGTTGCCCTTTCTCAGTTAAATCGTACTTTAGAACAACGTGCAGACAAACG
CCCTGTAAATTCAGATTTACGTGAATCAGGCTCTATTGAACAAGATGCAGACTTGATTATGTTTATTTACCGAGACGAAG
TCTATAACGATAACTCGGAAGATAAAGGCGTTGCAGAAATTATTATCGGTAAACAGCGTAACGGCCCAATTGGTCGAGTG
CGGTTAAAATTTAATGGACAATTCTCACGCTTTGACAATCTTGCCGAACAACGTGAATATCGAGATGATTATTAA

Protein sequence :
MDFSTVFYFLFSPHFSLKSNRYLRYHRRHSSIEISPMASQPQIKSSDKKTAQVSIPPHSIEAEQAVLGGIMLSNQHWDGI
AERVIADDFYTFQHRLIFTEMEHLMRNQSPIDLITLDQALRSHGVSDEVGGFAYLAELSNNTPNAINILAYADIVREKAI
LRELISVGNRIAENSYSPKGQDIKLILDEAEREVFAIAEKRTTSSEGPQNVINVLESTIEKIDILSKLENHSGVTGVTTG
FTDLDKKTAGLQPSDLIIVAARPSMGKTTFAMNLCENAAMASEKPVLVFSLEMPAEQIMMRMIASLARVDQTKIRTGQNL
DEIEWNKIASVVGMFKQKNNLFIDDSSGLTPTDVRSRARRVYRENGGLSMIMVDYLQLMRAPAFSDNRTLEIAEISRSLK
ALAKELQVPVVALSQLNRTLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYNDNSEDKGVAEIIIGKQRNGPIGRV
RLKFNGQFSRFDNLAEQREYRDDY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 2e-101 51
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 1e-101 51
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 2e-97 50
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 1e-101 50
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 1e-84 49
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 2e-97 49
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 4e-90 48
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 4e-90 48
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 6e-81 44