Gene Information

Name : ribD (NTHI1115)
Accession : YP_248643.1
Strain : Haemophilus influenzae 86-028NP
Genome accession: NC_007146
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG1985
EC number : 1.1.1.193
Position : 1063029 - 1064147 bp
Length : 1119 bp
Strand : +
Note : riboflavin-specific deaminase; HTP reductase; Similar to: HI0944, RIBD_HAEIN

DNA sequence :
ATGCTTGAATTCTCCTCACAAGATTGCGTATTTATGCAACGTGCCTTAGATTTAGCCGCCAAAGGTCAATATACCACTAC
ACCGAACCCATCGGTGGGATGCGTATTGGTTAAAAATGGTGAAATTGTGGGGGAGGGCTTTCATTTTAAGGCAGGACAAC
CTCATGCTGAACGCGTTGCTTTAGCTCAAGCTGGTGAAAATGCTAAAGGAGCAACCGCTTACGTCACCTTAGAGCCTTGT
TCTCACTATGGGAGAACACCACCTTGTGCATTAGGATTAATTGAGGCGGGCGTAGTGAAAGTCATTGCGGCTATGCAAGA
TCCGAATCCTCAAGTCGCAGGAAAAGGTTTGAAAATGTTGTCTGATGCTGGTATCGAAAGTGCAGTGAATCTATTAAACG
ATCAAGCGGAAAAAATAAATAAAGGCTTTTTAAAACGAATGCGTCAAGGTATGCCTTTTGTTCAACTAAAACTTGCCATG
AGTTTAGATGGACGAACTGCAATGGCAAGTGGAGAAAGTAAATGGATTACGGGCCCAGATGCTCGTTCGGACGTACAAAA
AATGCGAGCAAAATCATCCGCACTTTTATCTACTTCTGCGACAGTACTTGCAGATGATCCAAGCCTTAATGTACGCTGGG
ACGAATTTCCTGAAAATCTTAAAACAGAATATAAAAAAGAATGGCTTCGCCAGCCTGTGCGAGTCATTTTAGATTCACAA
CATCGCATTCAGCCGACTCATAAACTTTTTTTAACCCATTCTCCCGTTTGGTTAGTCTCTAGTGAAACACGAGATTTAAC
AGGCTTTCCTGATTTTTGTGAACAAATTATTCTTCCGAAAGAAAATTTACTAAAAGAATTAATGCGAGAGCTGGGAAAAC
GACAAATCAATACCCTTTGGGTAGAAGCTGGAGCAAATTTAGCGGGCAGTTTAATTGATGCGAAATTAGTGGATGAATTG
ATTATTTACATTGCGCCAAAATTACTTGGAGACAATGCTCGTGGTCTATGCCAATTACCGAATTTAACTAAACTTGCCGA
TGCACCATTATGGCAACTCAATGAATTAGAACAAATCGGTGACGATATAAAATTAACTTACACACCGAAAGGAGTCTAA

Protein sequence :
MLEFSSQDCVFMQRALDLAAKGQYTTTPNPSVGCVLVKNGEIVGEGFHFKAGQPHAERVALAQAGENAKGATAYVTLEPC
SHYGRTPPCALGLIEAGVVKVIAAMQDPNPQVAGKGLKMLSDAGIESAVNLLNDQAEKINKGFLKRMRQGMPFVQLKLAM
SLDGRTAMASGESKWITGPDARSDVQKMRAKSSALLSTSATVLADDPSLNVRWDEFPENLKTEYKKEWLRQPVRVILDSQ
HRIQPTHKLFLTHSPVWLVSSETRDLTGFPDFCEQIILPKENLLKELMRELGKRQINTLWVEAGANLAGSLIDAKLVDEL
IIYIAPKLLGDNARGLCQLPNLTKLADAPLWQLNELEQIGDDIKLTYTPKGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 7e-63 49
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 7e-63 49