Gene Information

Name : tnpR (RF_p32)
Accession : YP_247448.1
Strain :
Genome accession: NC_007110
Putative virulence/resistance : Unknown
Product : TnpR resolvase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 32042 - 32482 bp
Length : 441 bp
Strand : +
Note : Plasmid encoded site-specific recombinase

DNA sequence :
ATGAGATTATTTGGCTATGCTAGGGTATCAACCAATCAGCAACTTTTAGACCTACAGATAAAACGTTTAAAAGATGCTGG
GGTAAAAGAATCAAGAATATTCCATGACAAAGCAACAGGTAGTAACTTAGACAGAGCAGGGCTAAATAACTTATTGCATA
AGGTAGAAGAAGGGGATGTAATATTGATTACCAAGTTAGATCGTTTAGGCAGAGATACTGCCGATATGATTAACTTAGTT
AATCAGTTTGCTAATATAGGTGTAGCTGTGCGTTTTCTTGATGATGGTATTAGTACGGAAGGCAGTACGGGAAAAATGGT
TATTACAATCCTAAGTGCAATAGCAGAGGCCGAGAGAGCACGGATACTTGAAAGAACTAATGAAGGCAGGTTAGAGGCCA
AAACTAAAAAGGTATTAAGTTTGGTCGCAACCGTATTATAG

Protein sequence :
MRLFGYARVSTNQQLLDLQIKRLKDAGVKESRIFHDKATGSNLDRAGLNNLLHKVEEGDVILITKLDRLGRDTADMINLV
NQFANIGVAVRFLDDGISTEGSTGKMVITILSAIAEAERARILERTNEGRLEAKTKKVLSLVATVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpR ACK44544.1 Tn2 resolvase Not tested SGI1 Protein 3e-35 73
tnpR AGK07036.1 Tn2 resolvase Not tested SGI1 Protein 3e-35 73
tnpR AGK07094.1 Tn2 resolvase Not tested SGI1 Protein 3e-35 73
tnpR ACF06167.1 resolvase Not tested Tn5036-like Protein 7e-35 73
tpnR ADZ05795.1 resolvase Not tested AbaR17 Protein 1e-26 71