Gene Information

Name : rph (RF_0403)
Accession : YP_246419.1
Strain : Rickettsia felis URRWXCal2
Genome accession: NC_007109
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 423624 - 424343 bp
Length : 720 bp
Strand : +
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
ATGAGACAGTCAGGAAGAAAAAGCAACCAATTACGTCCTATTTCATTAGAATTATCTCCGCTTATTAATGCGGAAGGTTC
ATGCCTTATTAAAATCGGTAATACACATGTCATGTGTAGTGCTACTTGCGAAACTACCGTACCGCCGTTTTTACGAGGGC
AGAATCAAGGTTGGGTTACCGCTGAGTACGGCATGCTCCCAGGCTCTACATCCCAGCGTATTAAAAGAGAAGCAGCACAA
GGGAAGCAAGGAGGAAGAACCCAAGAAATACAGCGTTTGATAGGAAGAAACATGCGATGTGTAATTGACTTGAAGAAACT
AGGTGAGAGGCAGATTATTATAGATTGTGATGTTATTAATGCCGATGGCGGTACTAGAACGGCAGCGATAACAGGAAGCT
ACGTAGCATTACACCTAGCTATTAGATCATTGATGAAAAAGAGAATTTTAAAGGTAAATCCGTTAATTAGTCAAATTGCA
GCTGTTTCTTGCGGGATATATAAAGGTGAGGCGATACTAGATTTGGATTATTTAGAAGATAGCGATGCTGAAGTGGATAG
TAATTTTGTATTTGCAGGTAACGGTAATTTAATCGAAGTGCAAGGCACGGCAGAGAAAGAACCTTTTTCCGAAGAGCAGT
TTATAGCAATGTTAAAACTTGCTAAAGGCGGTGCGGCAGAATTATTTAAACTACAAAATCAAGTGCTGCTTGGGGCTTAG

Protein sequence :
MRQSGRKSNQLRPISLELSPLINAEGSCLIKIGNTHVMCSATCETTVPPFLRGQNQGWVTAEYGMLPGSTSQRIKREAAQ
GKQGGRTQEIQRLIGRNMRCVIDLKKLGERQIIIDCDVINADGGTRTAAITGSYVALHLAIRSLMKKRILKVNPLISQIA
AVSCGIYKGEAILDLDYLEDSDAEVDSNFVFAGNGNLIEVQGTAEKEPFSEEQFIAMLKLAKGGAAELFKLQNQVLLGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 7e-50 50