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Name : gabD (RF_0684) Accession : YP_246700.1 Strain : Rickettsia felis URRWXCal2 Genome accession: NC_007109 Putative virulence/resistance : Unknown Product : succinate semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 730466 - 731737 bp Length : 1272 bp Strand : + Note : - DNA sequence : ATGAACTTACTTAAAAATATTACGGGAAAGAATTATATAAACGGTGAATTTATAGAGTTCGGGAAGCAAATATCCGTTAT TAATCCTTCGACCTTAAAAGAAATTTCTACAGTTCCGAATTTAGGATTATCTGAGATTAATTCAGCAATTAATAATACGG TGCAAACTTTTTCTTCATGGTCACAAAGTTCATTTGAAGAAAGAATAGCGATTCTTAGAAAATGGTATAATTTAGTAATC GAAAATATTGATGAGCTAAGTCATATATTAACTCTAGAGCAGGGTAAGGTACTCTCTGAATCCAAAAAAGAAATTCTATA CGGAGCATCTTTTATTGATTGGTATACATATGTTATACATAATATTCACGGGACCATTAAACCGGGCAGTAGTAAAGCTC ATAAAATTGTTACGCAATATGAGCCGGTTGGAGCGTCTGTGGCTATAACTCCTTGGAATTTTCCAAATGCAATGATTACT CGTAAGGTAGTGCCTGCAATAGCTGCGGGTTGTAGCGTTATATTAAAACCGTCAAGTCTTACGCCTCTATCAGCTTTAAT ACTTGCGAAATTTGCAAGCGATGCCGGTTTGCCAGCCGGAGTATTTAACGTGATTACCGGTGATTCGGATGTTATAGGTA AGTCTTTTTGCGAAGATTTTAGGCTTCGGAAATTATCATTTACCGGTTCTACAAATGTCGGTAAAATTCTATATCAAAAT GCCGCAAATACTCTAAAACGTTTATCTTTGGAACTTGGAGGCAATGCTCCTTTCATTATAACGGCAGATAATGAGTTGGA AAAAGTAGCAAGCGATTTGGTAGTTGCTAAAACTAGAAATAGCGGCCAGTCTTGTACTTCACCTAATAGGATATTTATAG AAGAATCTATATATGAAAAATTTATAGAAATTCTAAAGGCTAAATTTACTAAGCTTAAATCTGGTGACGGATTTGATAAA GCATCAGATATAGGTCCGTTAATTAACTCTGCTGCCATAGAAAAAATACAAAAGCTACTCGCTGATGCACAAAATAAAGG AGCTAAATTAATTTGCGGCGGTAAAGCTGTTGATAATTTTATTGAGCCTATTATTATTGACTGTTTGGATAATATGGATA TCTTTAGAACAGAAATATTCGGTCCGGTGGTTGCGTGCTATAAATTTAAAGATTTGGATGAAGTAATAGAACGTGCAAAT AGTACCGAATACGGCTTGCAAGGATATGTATATTCAAATAATATATCTTGTGGCACAAATGATAGCAACTAG Protein sequence : MNLLKNITGKNYINGEFIEFGKQISVINPSTLKEISTVPNLGLSEINSAINNTVQTFSSWSQSSFEERIAILRKWYNLVI ENIDELSHILTLEQGKVLSESKKEILYGASFIDWYTYVIHNIHGTIKPGSSKAHKIVTQYEPVGASVAITPWNFPNAMIT RKVVPAIAAGCSVILKPSSLTPLSALILAKFASDAGLPAGVFNVITGDSDVIGKSFCEDFRLRKLSFTGSTNVGKILYQN AANTLKRLSLELGGNAPFIITADNELEKVASDLVVAKTRNSGQSCTSPNRIFIEESIYEKFIEILKAKFTKLKSGDGFDK ASDIGPLINSAAIEKIQKLLADAQNKGAKLICGGKAVDNFIEPIIIDCLDNMDIFRTEIFGPVVACYKFKDLDEVIERAN STEYGLQGYVYSNNISCGTNDSN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 4e-83 | 46 |
