Gene Information

Name : rph (XC_0960)
Accession : YP_242054.1
Strain : Xanthomonas campestris 8004
Genome accession: NC_007086
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 1153528 - 1154253 bp
Length : 726 bp
Strand : +
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
ATGTCCTTCTCCCGTCCCAGCGGCCGCACGGCCGACCAGCTGCGCCCCGTGCGCATCGAACGCGCCTTCACCCGTCACGC
CGAAGGCTCGGTGCTGGTCAGCTTCGGCGATACCCGCGTGCTGTGCACCGCCAGTGTGGAGAACCGCGTGCCGAACTTCC
TGCGCGGCAAGGGCGAAGGCTGGGTCACTGCCGAATACGGCATGCTGCCGCGGTCAACCCACACCCGCTCCGACCGCGAA
GCCGCGCGCGGCAAGCAGGGCGGACGCACGCTGGAAATCCAGCGCCTGATCGGCCGCGCACTGCGCGCCTGCGTCGACCG
CAATGCACTGGGCGAACGCACCATCACCCTGGACTGCGACGTGCTGCAGGCCGACGGCGGCACCCGTACCGCCGCCATCA
CCGGTGCTTACGTGGCGCTGGCCGACGCGGTGAACCTGCTGCTCAAGCGTGGCGACATCAAGAAGCATCCGCTGATCGGC
GCAGTGGCTGCGGTGTCGGTGGGTATCTACCGCGGCGAGCCGGTGCTGGATCTGGATTACCCGGAAGACAGCGACTGCGA
TACCGACATGAACGTGGTGATGAACGACGGTGGCGGCTTCATCGAGTTGCAGGGCACGGCCGAAGGCCATGCCTTCCGCC
GCGACGAACTCAACGCCCTGCTCGCACTCGCCGAAAAGGGCGTGGGCGAATTGTTCGAACTGCAACGCGCCGCACTCGCC
GGATGA

Protein sequence :
MSFSRPSGRTADQLRPVRIERAFTRHAEGSVLVSFGDTRVLCTASVENRVPNFLRGKGEGWVTAEYGMLPRSTHTRSDRE
AARGKQGGRTLEIQRLIGRALRACVDRNALGERTITLDCDVLQADGGTRTAAITGAYVALADAVNLLLKRGDIKKHPLIG
AVAAVSVGIYRGEPVLDLDYPEDSDCDTDMNVVMNDGGGFIELQGTAEGHAFRRDELNALLALAEKGVGELFELQRAALA
G

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 1e-63 63