|
Name : XC_0947 (XC_0947) Accession : YP_242041.1 Strain : Xanthomonas campestris 8004 Genome accession: NC_007086 Putative virulence/resistance : Resistance Product : ATP-dependent DNA helicase RecG Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1200 EC number : - Position : 1136662 - 1138803 bp Length : 2142 bp Strand : - Note : catalyzes branch migration in Holliday junction intermediates DNA sequence : GTGCCGCGCGCGCGTTCCGTCACCCCAAGCCTGGCCGTCGCTGGCCAGGCGCCGCTTTCCAGCTTGCCCGGGGTCGGCCC GAAAGTGGCCGAGAAATTTGCCGCGCGCGGCATTCTCAGCCTGCAGGATCTGTGGCTGCACCTGCCGCTGCGCTACGAAG ACCGCACCCGCCTGACCACCATCGCGCAGTTGCAGGGCGGGGTACCGGCGCAGATCGAGGGGCGTGTGGAGGCGATGGAG CGCGGCTTCCGCTTTCGCCCGGTGTTGCGCGTGGCGATGTCGGACGACTCGTGCGGCACGCTGGTGCTGCGCTTCTTCCA CTTTCGCGCGGCCCAGGTTGCGCAGTTTTCCCCGGGCACGCGCTTGCGCGTGTTCGGCACGCCCAAGCCCGGCCAGAACG GCTGGGAAATCGTTCACCCCAGTTACCGCGTCCTGGCGCCGGATGAAGATGCGGGCCTGGGCGATTGCCTGGACCCGGTG TATCCGGTGCTGGAAGGTGTCGGGCCGGCCACGCTGCGCAAGCTGATCGGCCAGGCATTGGAGCGCTTGCCGCCGGAGGC CGCGCTGGAACTGCTGCCGCCGCACTGGTTGCAGGACGAACAGCTGCCGTCGCTACGCAGCGCGCTGCTGACCATGCATC GCCCACCGGTGGACACCGACCCGCAGCAACTGCTGGCCGGCGGACATCCGGCGCAACAGCGATTGGCCATCGAAGAACTG CTGGCGCATCAAGTGAGCCTGCGCCGGCAACGCATCGCGCTGCAGCGCTTCCGCGCACCGCAGTTGCGCGGTGGCCGCTT GGTGCAGCAGTTACGCAAGGCCTTGCCGTTCCAGCTCACCGGCGCGCAGCAGCGCGTGTTCGAGCAGATCGCCCACGATC TGGCGCAGCCGGCACCGATGCTGCGGCTGGTGCAGGGCGATGTGGGCAGCGGCAAGACCGTGGTGGCGGCACTGGCCGCG ATGTTGGCGGTCGAACACGGCAAACAAGTGGCCCTGGCTGCGCCCACCGAGCTGCTGGCCGAGCAGCATCTGGCCAACCT GCGTGGCTGGCTGGAACCGCTGGGCGTGCGCATCGTCTGGCTGGCCGGCAAGGTCACCGGCAAGGCGCGCGTCGCGGCGA TGGCCGAAGTAGCCTCCGGGCAGGCACAGGTGGTGGTGGGCACGCATGCGCTGATGCAGGACGCGGTGGTCTTCCACGAT CTGGCGCTGGCCATCATCGACGAGCAGCACCGCTTCGGCGTGCATCAGCGCCTGGCGCTGCGCGACAAGGGCGCGGCTGC CGGCAGCGTGCCGCATCAACTGGTGATGACCGCCACGCCGATCCCGCGCACGCTGGCAATGGCGGCCTACGCGGATCTGC ACGTCTCGGCCATCGACGAACTGCCGCCCGGTCGCACGCCGGTGCAGACCATCGTGCTGAGCGCCGAGCGCCGGCCCGAG CTGGTGGAGCGCATTCGCGCGGCCTGTGCCGAAGGCCGGCAGGCGTACTGGGTCTGTACCCTGATCGAAGAAAGCGAAGA CACCGACAAGGGCGCGCAGAACGGCCCGCCGCGCATCGAAGCACAGGCCGCGCAGGTCACCTTCGAAACGCTCTCGGCGC AACTGCCGGGCGTGCGCGTGGCGCTGGTACACGGGCGCATGAAACCGGCCGAAAAGCAGCAGGCCATGCTGGATTTCAAG CAGGGCCGCACCGATCTGCTGGTCGCCACCACCGTGATCGAAGTGGGCGTGGATGTGCCCAACGCCTCGCTGATGATCAT CGAGAACGCCGAGCGTCTCGGCCTGGCCCAGTTGCACCAGTTACGCGGGCGGGTCGGGCGCGGCGCGGCGGCGTCCAGCT GCGTGCTGCTCTATCAGGGCCCGCTGTCGCTGATGGCACGCCAGCGGTTGGAGACCATGCGCCAGACCAACGATGGCTTC GTGATTGCCGAAAGGGATCTGGAGCTGCGTGGCCCCGGCGAGTTGCTGGGTACGCGCCAGACCGGTCTGGCGAGTTTCCG CATCGCCGACCTGGCGCGCGATGCCGGCCTGCTGCCGCGGGTGCAGGTGCTGGCGGAGCGCTTGCTCGACGAAGCGCCGG AGATCGCCGACCGCGTGGTCGCACGCTGGATCGGTGGCGCAGTGCGGTATGCGGCCGCTTGA Protein sequence : MPRARSVTPSLAVAGQAPLSSLPGVGPKVAEKFAARGILSLQDLWLHLPLRYEDRTRLTTIAQLQGGVPAQIEGRVEAME RGFRFRPVLRVAMSDDSCGTLVLRFFHFRAAQVAQFSPGTRLRVFGTPKPGQNGWEIVHPSYRVLAPDEDAGLGDCLDPV YPVLEGVGPATLRKLIGQALERLPPEAALELLPPHWLQDEQLPSLRSALLTMHRPPVDTDPQQLLAGGHPAQQRLAIEEL LAHQVSLRRQRIALQRFRAPQLRGGRLVQQLRKALPFQLTGAQQRVFEQIAHDLAQPAPMLRLVQGDVGSGKTVVAALAA MLAVEHGKQVALAAPTELLAEQHLANLRGWLEPLGVRIVWLAGKVTGKARVAAMAEVASGQAQVVVGTHALMQDAVVFHD LALAIIDEQHRFGVHQRLALRDKGAAAGSVPHQLVMTATPIPRTLAMAAYADLHVSAIDELPPGRTPVQTIVLSAERRPE LVERIRAACAEGRQAYWVCTLIEESEDTDKGAQNGPPRIEAQAAQVTFETLSAQLPGVRVALVHGRMKPAEKQQAMLDFK QGRTDLLVATTVIEVGVDVPNASLMIIENAERLGLAQLHQLRGRVGRGAAASSCVLLYQGPLSLMARQRLETMRQTNDGF VIAERDLELRGPGELLGTRQTGLASFRIADLARDAGLLPRVQVLAERLLDEAPEIADRVVARWIGGAVRYAAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 2e-105 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| XC_0947 | YP_242041.1 | ATP-dependent DNA helicase RecG | BAC0356 | Protein | 2e-166 | 56 |
