Gene Information

Name : XC_0754 (XC_0754)
Accession : YP_241852.1
Strain : Xanthomonas campestris 8004
Genome accession: NC_007086
Putative virulence/resistance : Virulence
Product : N-acetylglucosamine-6-phosphate deacetylase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1820
EC number : -
Position : 900552 - 901706 bp
Length : 1155 bp
Strand : +
Note : -

DNA sequence : 
ATGGATGCTTCCCCGATTCAAGCGCTTTGCAATGCACGCGTGCTCACCGATGACGGCCTGCAGGACGGCCTGGCCGTGCT
GCTGGACGGCGCGCAGATCCAGGCCGTTGTCGCGGCCGACGATGCGCGCGTGGCGCAGGCCGGCACGCGCGTGGATCTGG
GCGGGGCGACCCTGCTGCCCGGCTTCATCGACATCCAGGTCAATGGCGGCGGCGGGGTGTTGTTCAACAACGCCTGCACG
CCGCAGGCGCTGGCGACGATCGCCGCAGCGCATCGCCGCTACGGCACCACCGGCATGTTGCCCACGCTGATCAGCGACAC
CGCCGAGGTGATGGCCGAGGCCATCGCCGCCACGCGCCAGGCGATCGCACAGGGCGTGCCGGGCGTGCTTGGGATTCATC
TGGAAGGCCCGTACCTGAGCCCGGCGCGCAAAGGCACCCACGACGCACAGAAGTTCCGCGTGCCCGACGCGCACGAGATC
GCGGTGGACACCTCGCTGGACAACGGCGTCACCCTGATCACGCTCGCGCCCGAGCGCGTGCCGCTGGACGACATCCGCGC
CTTTGTCGCCGGTGGTGCAGTTGTGTTTGCAGGCCATACCGCCGCGACCTACGAACAGGCGCGCGACGGCATTGCCGCCG
GCGTCAGCGGCTTCACCCATCTGTACAACGCGATGTCGCCACTGGCCGGGCGCGAGCCCAATGCCGTGGGCGCCGCACTG
GAAGATCCTGCGGTGTGGTGCGGCGTCATCGTGGACGGCGTGCATGTGCATCCGGCCAGCCTGCGCGTGGCGCTGGCCGC
CAAGCCGCGCGGCAAGCTGCTGCTGGTCACCGACGCCATGCCGATGGTCGGCGCCGACAGCCCCAGCTTCGACCTGTACG
GCGAAACCATCACCGCCATCGACGGCGTGGTACGCAATGCCGCCGGTGCGCTTGCCGGCTCCGCGCTGGACATGGCCACC
GCGGTGCGCAACAGCGTGCAATGGCTGGGCGTGGACCTGGCCGAAGCCGCGCGCATGGCGTCCACCTATCCGGCGCAGTG
CATCGGCCTGGGCGAGCGCCTGGGCCGCATCGCACCGGGTTACCAGGCCGACCTGGTGCTGGTGGATGCAGACGTGCACG
TGCTGGACACCTGGGTGGCGGGGCAGCGCGACTGA

Protein sequence : 
MDASPIQALCNARVLTDDGLQDGLAVLLDGAQIQAVVAADDARVAQAGTRVDLGGATLLPGFIDIQVNGGGGVLFNNACT
PQALATIAAAHRRYGTTGMLPTLISDTAEVMAEAIAATRQAIAQGVPGVLGIHLEGPYLSPARKGTHDAQKFRVPDAHEI
AVDTSLDNGVTLITLAPERVPLDDIRAFVAGGAVVFAGHTAATYEQARDGIAAGVSGFTHLYNAMSPLAGREPNAVGAAL
EDPAVWCGVIVDGVHVHPASLRVALAAKPRGKLLLVTDAMPMVGADSPSFDLYGETITAIDGVVRNAAGALAGSALDMAT
AVRNSVQWLGVDLAEAARMASTYPAQCIGLGERLGRIAPGYQADLVLVDADVHVLDTWVAGQRD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1783 NP_231418.1 N-acetylglucosamine-6-phosphate deacetylase Not tested VPI-2 Protein 2e-51 45
nagA-2 YP_001217323.1 N-acetylglucosamine-6-phosphate deacetylase Not tested VPI-2 Protein 2e-51 45
nagA ACA01848.1 N-acetylglucosamine-6-phosphate deacetylase Not tested VPI-2 Protein 2e-51 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XC_0754 YP_241852.1 N-acetylglucosamine-6-phosphate deacetylase VFG1116 Protein 1e-51 45