Gene Information

Name : XC_0546 (XC_0546)
Accession : YP_241647.1
Strain : Xanthomonas campestris 8004
Genome accession: NC_007086
Putative virulence/resistance : Unknown
Product : IS1477 transposase ORFB
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 652200 - 653252 bp
Length : 1053 bp
Strand : +
Note : -

DNA sequence :
GTGCCGCCAGCACGGTTTCAGCCCGGCCAGCTTCTACCAGTGGCGGGCCAAGTACGGCGGCATGGAGGCCGAAGACGCGA
AGCGCCTGAAGGAGCTGGAGCAGGAGAACAACCGCCTGAAGCGGTTGCTGGCCGAGGCGCACCTGGACATCGAGGCGCTG
AAGGTCGGGTTCGGGGTAAAACGCTAGCCCCGCAACGCAAGCGCGAGGCAATCCGGCGCATGTGCGAGCTGACGTCGATC
AGCGAGCGCCGGGCTTGTCGCCTTGCGGGGATCTCCCGCGATGCTTTCCGCCACGCGCCGACACCCACGCCGGCGACGCA
AACCCTGTCGGCCAGACTGGTGGAACTGGCGCAGGCGCGTCGCCGCTTCGGCTATCGCCGCCTGCACGACCTGCTGCGCC
CGGAGTCTCCGCAGGTGAACCATAAGAAGATCTACCGTCTGTACCGCGAGGCGAAGCTGAGCGTGCGCCGGCGCAAGAAG
GCCAAGTTCCCGGCGGCACAGCGGCAGCCGTTACGGCCAGCGCGGCATCCCAACGAGGTAATCAGCATGGACTTCGTCTT
TGATCAGTTGGCCAGTGGCCGCCGCATCAAATGCCTGACCGTCGCCGACGACTTCACCCATGAATGCGTGGACATCGCGG
TGGACCATGGCATCAGCGGGGCTTACGTGGTGCGTGTGCTGGAGCAGATCGCCTGCTTCCGCGGCTATCCCCGCGCGGTG
CGCACGGACAACGGCCCGGAGTTCACCAGCCGCGCCTTCATCACTTGGGCACAGCAGCGTGGCATCGAACACATCCTGAT
CGAACCCGGCAAACCCATGCAGAACGGCTACATCGAGAGCTTCAACGGCAAGTTCCGCGACGAATGTCTCAACGAACACT
GGTTCACGTCGCTGATCCAGGCTCGCGAGGTCATCGCCGATTGGCGGCGTGACTTCAACGAGGTACGTCCGCACAGCAGC
TGTGGTCGCATCCCGCCAGCGCAGTTTGCCTCCAACCACCGAGCACAAACCGGCAACAACGCAGTACCCTTCAACCCCGG
GCTTTATCAGTAA

Protein sequence :
MPPARFQPGQLLPVAGQVRRHGGRRREAPEGAGAGEQPPEAVAGRGAPGHRGAEGRVRGKTLAPQRKREAIRRMCELTSI
SERRACRLAGISRDAFRHAPTPTPATQTLSARLVELAQARRRFGYRRLHDLLRPESPQVNHKKIYRLYREAKLSVRRRKK
AKFPAAQRQPLRPARHPNEVISMDFVFDQLASGRRIKCLTVADDFTHECVDIAVDHGISGAYVVRVLEQIACFRGYPRAV
RTDNGPEFTSRAFITWAQQRGIEHILIEPGKPMQNGYIESFNGKFRDECLNEHWFTSLIQAREVIADWRRDFNEVRPHSS
CGRIPPAQFASNHRAQTGNNAVPFNPGLYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 5e-76 62