Gene Information

Name : XC_3981 (XC_3981)
Accession : YP_245040.1
Strain : Xanthomonas campestris 8004
Genome accession: NC_007086
Putative virulence/resistance : Virulence
Product : two-component system regulatory protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 4697425 - 4698090 bp
Length : 666 bp
Strand : +
Note : -

DNA sequence : 
ATGCACCTGCTCCTTGTTGAAGACGACACCATGCTTGCCGACGCCATCTACGACGGCGTCCGCCAGCAGTCCTGGACCAT
CGACCATGTCGGCACCGCCGCTGCGGCCAGGACCGCGCTGGTGGAACACCACTACACCGCGGTGTTGCTGGACATCGGCC
TGCCGGGCGATTCCGGGCTCACGGTGATCCGCTACATGCGTGGCCATTACGATGCTACCCCGGTGATCGCGCTGACAGCG
CGCGGCCAGCTCACCGACCGCATCCGCGGGCTGGATGCCGGCGCAGACGACTACCTGGTCAAGCCGTTCCAGTTCGATGA
ACTGATGGCACGCGTGCGCGCCATCGCCCGGCGCAGCCAGGGCCGCGTGGTGCCGTTGCTCACCCAGGGCGAAGTGTCGG
TGGACCCGAGCAGCCGCAAGGTCACCCGCAACGGCAAGTGGGTCGCATTGAGCGCGCACGAATACCGCCTGCTGCTGGCC
TTGATGGAGCGCGCCGGGCGCGTGGTCACCAAGGACCAGCTCGAAGAAGGCGTGTATGGCGGCCCGTCCGAAGGCGGCAG
CAACATGATCGCGGTCTACGTGCACCAGCTGCGGCGCAAGCTCGGCGACGAGGTCATCAGCACCATCTATGGCCAGGGCT
ACATGATCGGCCAGGCGCCCGAATGA

Protein sequence : 
MHLLLVEDDTMLADAIYDGVRQQSWTIDHVGTAAAARTALVEHHYTAVLLDIGLPGDSGLTVIRYMRGHYDATPVIALTA
RGQLTDRIRGLDAGADDYLVKPFQFDELMARVRAIARRSQGRVVPLLTQGEVSVDPSSRKVTRNGKWVALSAHEYRLLLA
LMERAGRVVTKDQLEEGVYGGPSEGGSNMIAVYVHQLRRKLGDEVISTIYGQGYMIGQAPE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 4e-32 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XC_3981 YP_245040.1 two-component system regulatory protein NC_002516.2.879194.p Protein 2e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XC_3981 YP_245040.1 two-component system regulatory protein VFG0473 Protein 2e-32 41