Gene Information

Name : XC_3917 (XC_3917)
Accession : YP_244977.1
Strain : Xanthomonas campestris 8004
Genome accession: NC_007086
Putative virulence/resistance : Unknown
Product : ISxcC1 transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 4623357 - 4623938 bp
Length : 582 bp
Strand : -
Note : -

DNA sequence :
ATGAAACTCAATCAACGTCGCCGCAGCAAGCGCCGGGTACCGACGCGTCATCCACAGCCGCTGGCATGCGGTGATCGACC
CAACGCTGGATGGTCGATCGATTTCATGTCTGATGCGCTATGGGATGGTCGACGGTTCCGCACGTTCAATGTCATCGACG
ATTTCAGTCGGGAAGCCTTGGCCATCGATGTGGACCTGAATCTTCCGGCTGCCCGCGTCATCCGCACGTTGGAACGTATC
GCAGCTTGGCGCGGCTATCCGAACAAGCTGCGTTTGGACAATGGCCCGGAATTTGTTGCATTGGCCTTGGCCGAGTGGGC
TGAGCGCAAGGGTATCGCGTTGGATTTCATCGAGCCGGGGCGTCCGATGCAGAACGGTTTTATCGAACGCTTCAACGGCA
GCTACCGGCGTGGCGTATTGGATATGCACATATTCCGCACGCTGAGCGAGGTCCGCGAACAGACCGAACAGTGGCTGGCC
GACTACAACCAACAAATACCGCACGACAGCCTGGGCGGGCTAACGCCCGCCGAGTTCCGTGAGCAACATCAACCGCAGAC
CTCTAGCTTTATCTGGCATTGA

Protein sequence :
MKLNQRRRSKRRVPTRHPQPLACGDRPNAGWSIDFMSDALWDGRRFRTFNVIDDFSREALAIDVDLNLPAARVIRTLERI
AAWRGYPNKLRLDNGPEFVALALAEWAERKGIALDFIEPGRPMQNGFIERFNGSYRRGVLDMHIFRTLSEVREQTEQWLA
DYNQQIPHDSLGGLTPAEFREQHQPQTSSFIWH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAB46578.1 IS1222-like transposase Not tested HPI Protein 3e-29 45
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 2e-34 44
RS13 AAP82958.1 putative transposase Not tested PAPI-2 Protein 9e-29 44