Gene Information

Name : XC_3665 (XC_3665)
Accession : YP_244726.1
Strain : Xanthomonas campestris 8004
Genome accession: NC_007086
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 4352184 - 4352903 bp
Length : 720 bp
Strand : +
Note : -

DNA sequence :
ATGCTCAAGATGCAATCGGTCTCCAAGGTCTTCCGCACCGAACAGGTGGAAACACACGCGCTGCGCTCGCTCGACCTGCA
TGTGCGCGAAGGCGAATTCGTCGCCGTTACCGGGCCGTCGGGTTCGGGCAAGACCACCTTCCTCAACCTGGCCGGGCTGC
TGGAAACCTTCACCAGCGGGCAGTACCTGCTCGACGGCGAAGACGTCAGCCATCTCTCCGATGACGCGCGCTCGCGCCTG
CGCAACCAGAAGATCGGTTTCATTTTCCAGGGCTTCAACCTGATTCCCGACCTCAACCTGTTCGACAACGTCGATGTGCC
GCTGCGCTATCGCGGCATGGCCGCCGCCGAGCGCAAGCAGCGCATCGAAGAAGCGCTGACCAAGGTCGGCCTGGGCTCGC
GCCTGAAGCATTACCCCACCGAACTGTCGGGCGGCCAGCAGCAGCGCGCAGCGATCGCACGCGCACTGGCCGGCAGCCCG
CGCCTGCTGCTTGCCGACGAACCCACCGGCAACCTCGACTCGCAGATGGCACGCGGCGTGATGGAGTTACTGGAAGAAAT
CAACAGCCAGGGCACCACCATCGTGATGGTGACCCATGACCCGGAACTGGCCGCACGCGCGCAGCGCAACGTGCACATCG
TCGACGGCCAGGCCACGGATCTGGAACGCAATCCCAGCCTGATGCGTGCGCCCGCCGCCGCATCCACCCTGGCCGACTGA

Protein sequence :
MLKMQSVSKVFRTEQVETHALRSLDLHVREGEFVAVTGPSGSGKTTFLNLAGLLETFTSGQYLLDGEDVSHLSDDARSRL
RNQKIGFIFQGFNLIPDLNLFDNVDVPLRYRGMAAAERKQRIEEALTKVGLGSRLKHYPTELSGGQQQRAAIARALAGSP
RLLLADEPTGNLDSQMARGVMELLEEINSQGTTIVMVTHDPELAARAQRNVHIVDGQATDLERNPSLMRAPAAASTLAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-27 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-28 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-27 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-27 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XC_3665 YP_244726.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-39 49
XC_3665 YP_244726.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 7e-44 48
XC_3665 YP_244726.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-31 46