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Name : XC_3025 (XC_3025) Accession : YP_244093.1 Strain : Xanthomonas campestris 8004 Genome accession: NC_007086 Putative virulence/resistance : Virulence Product : HrpF protein Function : - COG functional category : - COG ID : - EC number : - Position : 3616676 - 3619441 bp Length : 2766 bp Strand : - Note : - DNA sequence : ATGTCGCTCAACACGCTTTCGACCGGGAGTACCGCCGGTCTGTTTCTACCTCTGACGGATGACGCGTCGTCCCCGGGGCT GCTCGGATCCGATTCGGCCATGAATGACTCCGATCTGTTGCTGGCGATGGACAACCTGTTTCTGCAGCAGATTTACCGTT TGATTGCCGCCACCTACGGCAATACGTCGCTCAATGGGCCAGGCAGTGGTATTCCGGGGCTTGACACGCCTTCAGCAGAC GACCTTCAAGCCAGCCAGCCGATTGAGAAACGGACCTCCTGGCCGACGCTATCGGCTCCGTTCAATGTCAAGGACATCAA GGGATCCAGGTTGCCGCCTGCGGTGGATGGGTCATCGGTGACCTGGGAGGGCGGCACGCTCACCCCATCGGAGCTTCAGA TTGTTTCGACACTCAATCAGCACAAAGACAAGACGCCGCTGGAGTTCGCAAAACTCGACGACAAGATCAATGATCCATCT ACACCTCCGGATCTGAAGAGTGCGCTGCAAGGCTTGCAGAAAGATCCGCGTCTTTTCTTCGCCATCGGTTCGCAGGGCGA CGGCAAATGCGGCGGCAAGATCAAGGCGGGTGATTTGTGGGATTTTGCAGACCACCATCAACAGGTGACCGCTCTGGGCG GGAAGAATGCCGAGTTCAATCCTAAAAACATCAAGGGAGCGACACCGCCTCCTGCCGCAGAAGGTTCGTCGGTAACCTGG GACGGCGGCACGCTGACGCAATCCCAGCTTGAGATCGTCTCTACGCTCAATCAGCATCGCGACATGATGCCGATCGAGTT CGCCAAGCTCGATGAAAAGATCAACGACCCAGCCACTCCGCCCGACCTGAAAAAAGCGCTGCAGGGCCTGCAACAGGATC CTGGCCTGTTCTTTGCGATGGCGTCTCAGGGTCACGGCAAGCACCACCACGACGACCAGGGCAAGTGCAATGGCAAGCTC ATCGCCGACAATCTTTACGACTTCGCCGACCGCCATCCGCAGGTGACGGCGCAGGGCGGCAAGAACGCGACCTACAATCC CGAAAAAATGAAGGGGCGCGACCTGCCGCCGCCGGTGGACGGCTCTTCGGTCACGTGGGATGGCGGGACGCTCACCCAGA ACGAATTGGAGATCGTCGCCACACTTAATCGCCACAAGGACAAGTGCCCAGTCAAGTGGACAGATCTCGATGCAAAGTCG AAGGATCCCGCCATCCCGCCGGATCTGCAAAAAGCGTTTGCAGATCTACAGCAAGATCCAGCTCTTTTTCATGCAATTGG TGCGCAGGGTAGCAAAGGAAGTTGCGATGGAAAATTCACTGAAAAGGATCTCACACGCTTTTCAGTGCCCGAAAAACACG CACAGATCGCTCAATATGCCGAGCAGCAAGCAAAGGGCTACACGCAAAACTATGTGGCGTCTGACAGCCCCGACAAGACC GAGCCGACGGTCATGACCGAGAGTGACGCGATGCGTGAACTCTACCGCTACTCGGACTATCTGCCCAAGGATCTAAACCA GGACGCGTTCAAGCAATTGGTCGAAGGCGATAGCACGACCAAGAAGAGCCCGCCGCAGGTCATTGCCGCCGCACAGTATT TTCGTGAGCATCCCGACCAGTGGAAAGCGCTGGCTGGCGACAAAGAGTCGATGAGCACGGCAGATTTCCTGCAGAAATCT ACATCAGAGATGCACCTGACCGCGCCCGAACTGAAAACGCTGGACACCATCAATAGCCACCAGGAAGCGTTCTTCGGCGA CGGCAAAGAGGTAACGCGCGACAAGCTCGACACGATTGTCAAGGATGATAAAGCCGACCCCGCAGTGCGCGACGCGGCCA AGCAACTTTTGGGCGACCCGCTACTGTTCGGCTTGTTGAACAACGCGATCACCGGCTACAAGAAGCCCCACAGCTTCTTC GGTGGTGGCCATGTCGTCGACTCGGGAAAGATCAGCAACAAAGATTTTCAGCAGTTCTACGAGCACATGACGGCGGTCAA CAAAACCCTGGATACACCGCCCACGCATGCAGCCACATCGCCCGAGCAAAAGAAGGCCGTCGCGGACATGCTGATGGGAA AAGCCGATCAGCCCGAGATCAAGAGGAAAAAACACGATGTCGGTACCTTCAGCAAGGGATTGCATGAGTTTCTCAAGTGG GACAGCAAGATCCTGGATGGGATTTCCGTAGCACTTAGTGCAATGAACGGCATTCCCCTGATCGGCGAGGTTGCCGATGC AGCAGCGCTAGCATTTGAGAGCGAAGCGCAGGCAGCACAGGTAATTGATACCGCACTGCAAGGTGGCAACCTGTCACTCG CGTGGAAACTCGCCGGCATCAATATGGCTGGAGCGGTGGTTGGCGCCGTTGGCGGACCCACGGCCAGACTCGCAGCCAAG GGAGCAGCCAAGGGGGTCGCCGAGGGCGCAGCCAAGGGAGCGACCCAGGGTACAACCAAGGGCGCGGCCAAAGGAGGCGG CAAGGGAGTAGCCGAGCGGGAAAAACCCCTTGATATTGCTAAAGGCTACATAATAGGTACTAGCATCAACAGGCCGACTG AAATGTTGAAAACTCCCGTGTTGGCAGGCTTGCACTATGAAGAAGTGCGGCTGGATAAGGAGAAGAAAAAGGGCGAGATT CGCAAGAATCTGGAAGCGGCGGGCGGGGTGCCATTGGGGAAACAGTTTATTCCAAAAGCAATTGCCGACAACTTCGAGGC AGACACGAAAGAAAACCTCAGGCATGTGAGGGGGCGCCGCAAGTAA Protein sequence : MSLNTLSTGSTAGLFLPLTDDASSPGLLGSDSAMNDSDLLLAMDNLFLQQIYRLIAATYGNTSLNGPGSGIPGLDTPSAD DLQASQPIEKRTSWPTLSAPFNVKDIKGSRLPPAVDGSSVTWEGGTLTPSELQIVSTLNQHKDKTPLEFAKLDDKINDPS TPPDLKSALQGLQKDPRLFFAIGSQGDGKCGGKIKAGDLWDFADHHQQVTALGGKNAEFNPKNIKGATPPPAAEGSSVTW DGGTLTQSQLEIVSTLNQHRDMMPIEFAKLDEKINDPATPPDLKKALQGLQQDPGLFFAMASQGHGKHHHDDQGKCNGKL IADNLYDFADRHPQVTAQGGKNATYNPEKMKGRDLPPPVDGSSVTWDGGTLTQNELEIVATLNRHKDKCPVKWTDLDAKS KDPAIPPDLQKAFADLQQDPALFHAIGAQGSKGSCDGKFTEKDLTRFSVPEKHAQIAQYAEQQAKGYTQNYVASDSPDKT EPTVMTESDAMRELYRYSDYLPKDLNQDAFKQLVEGDSTTKKSPPQVIAAAQYFREHPDQWKALAGDKESMSTADFLQKS TSEMHLTAPELKTLDTINSHQEAFFGDGKEVTRDKLDTIVKDDKADPAVRDAAKQLLGDPLLFGLLNNAITGYKKPHSFF GGGHVVDSGKISNKDFQQFYEHMTAVNKTLDTPPTHAATSPEQKKAVADMLMGKADQPEIKRKKHDVGTFSKGLHEFLKW DSKILDGISVALSAMNGIPLIGEVADAAALAFESEAQAAQVIDTALQGGNLSLAWKLAGINMAGAVVGAVGGPTARLAAK GAAKGVAEGAAKGATQGTTKGAAKGGGKGVAEREKPLDIAKGYIIGTSINRPTEMLKTPVLAGLHYEEVRLDKEKKKGEI RKNLEAAGGVPLGKQFIPKAIADNFEADTKENLRHVRGRRK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| XC_3025 | YP_244093.1 | HrpF protein | Virulence | Hrp PAI | Protein | 0.0 | 100 |
| hrpF | NP_636591.1 | HrpF protein | Virulence | Hrp PAI | Protein | 0.0 | 100 |
| hrpF | AAP34358.1 | HrpF | Virulence | Hrp PAI | Protein | 0.0 | 69 |
| hrpF | NP_640749.1 | HrpF protein | Virulence | Hrp PAI | Protein | 0.0 | 69 |
| hrpF | AAB86527.1 | HrpF | Virulence | Hrp PAI | Protein | 0.0 | 67 |
| hrpF | YP_362142.1 | HrpF protein | Virulence | Hrp PAI | Protein | 0.0 | 67 |
| hrpF | BAB07869.1 | HrpF | Virulence | Hrp PAI | Protein | 0.0 | 66 |
| hrpF | YP_198705.1 | HrpF protein | Virulence | Hrp PAI | Protein | 0.0 | 66 |
