Gene Information

Name : XC_3020 (XC_3020)
Accession : YP_244088.1
Strain : Xanthomonas campestris 8004
Genome accession: NC_007086
Putative virulence/resistance : Virulence
Product : HrpD6 protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3612915 - 3613157 bp
Length : 243 bp
Strand : +
Note : -

DNA sequence :
ATGTTCGATGCCATGACCGACACGCTCACCCAGGATATGAGCAAGATCTTGCAGACCAAGGCGCAGGATCTCTCAGGCGA
GCGACTGCGCAACATCGAGGCAGCGCTGCACGCGACAGCGCAACAACTCCGTGTGCATTGGTCCGCCGCGAGCGATCAGG
CTGCGCGCAACGATTTCATTGTCTTGCACGACGGCATCAACGCTGCACAAGACATCGTCGCGCACATCGCCAGCATGCCT
TGA

Protein sequence :
MFDAMTDTLTQDMSKILQTKAQDLSGERLRNIEAALHATAQQLRVHWSAASDQAARNDFIVLHDGINAAQDIVAHIASMP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
XC_3020 YP_244088.1 HrpD6 protein Virulence Hrp PAI Protein 4e-31 100
hrpD6 NP_636596.1 HrpD6 protein Virulence Hrp PAI Protein 4e-31 100
hrpD6 AAD21324.1 HrpD6 Virulence Hrp PAI Protein 3e-26 83
hrpD6 YP_362149.1 HrpD6 protein Virulence Hrp PAI Protein 5e-26 83
hrpD6 BAB07866.1 HrpD6 Virulence Hrp PAI Protein 8e-26 82
hrpD6 YP_198716.1 protein HrpD6 Virulence Hrp PAI Protein 1e-25 82
hrpD6 NP_640753.1 HrpD6 protein Virulence Hrp PAI Protein 2e-24 79
hrpD6 AAP34353.1 HrpD6 Virulence Hrp PAI Protein 6e-24 78