Gene Information

Name : XC_3019 (XC_3019)
Accession : YP_244087.1
Strain : Xanthomonas campestris 8004
Genome accession: NC_007086
Putative virulence/resistance : Virulence
Product : HrpD5 protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3611957 - 3612904 bp
Length : 948 bp
Strand : +
Note : -

DNA sequence : 
ATGACCATGCAACTTCGCGTGCTGACGGGAATCCATGCCGGCGCACGATTAGATTTGCAGCCAGGCAGCTATACGTTAGG
CGCCGATCCCCAAGCCGAAATCCGGATCGAAGATTGGCCTGATTGTTCGCTCATCATCGAGGTGGATGCAGATGGTCAAG
TGTGTTATCGCAGCGAAGCGTTGCCAACGACAGCCTTTGTTGCGCTGCATCCGGTGCGCTTTGGTCCGTTGGTGCTCTGC
ATGGGCGACGCTGCGGCCGATTGGCCGGACGATGTTGCGCTGCTGGAGCAGCTACTGTCGCCCGCCGCGACACCGGCAGC
GCCTTCGCCACGCAGGTCCAGGCGCACTGCATTGCGTGCAGTGGTGGGCGCCATGCTAGCGCTGGCCGCCGCGGCACTGC
TGCCCTCCCTGCTCCCGGCGTTTCTCTCCGATGCGGCTCCCCCGCGCAGCCAGGACAACCAGCTTAATCAGGTGCGATTC
GTGCTGAAACGGCTGGGCTTGCGCGAAGCGCGCGTGGAGCAGGTCGGGTCGCGCGTGCGGGTCGAGGGCCTGGTGACAAG
CAGCGCGGATGCGGCACGCCTGCGCGCACAACTGCATCGGGATCAACATGCGGTCACGGTCGATGTGGTGGTGGTGGATG
AGGTATTGGCAACCCTGCGCGATACCTTGGCCGACCGCGACCTGAGCGTGCGTTACGACGGCCAGGGTGTTTTTTCGATT
GCCGGCAGCAGCGACAACGCCGAGCGTGCGACCCGACGCATCGCCGATCTACGCAGCGATCTGGGCCCGGAAATCCGCAC
ACTGCATGTGGAGATCACCCAGCAGGACCCGTCCGTGAAACCGCCCGCCAATTACGACGCCGCCCTGCTCGCCGACGGGC
TGCATTACGTCGAGACGCCGGACGGTACCAAGCACCTGACTTCCCTGCCGCAGCAAGCGGCGCCATGA

Protein sequence : 
MTMQLRVLTGIHAGARLDLQPGSYTLGADPQAEIRIEDWPDCSLIIEVDADGQVCYRSEALPTTAFVALHPVRFGPLVLC
MGDAAADWPDDVALLEQLLSPAATPAAPSPRRSRRTALRAVVGAMLALAAAALLPSLLPAFLSDAAPPRSQDNQLNQVRF
VLKRLGLREARVEQVGSRVRVEGLVTSSADAARLRAQLHRDQHAVTVDVVVVDEVLATLRDTLADRDLSVRYDGQGVFSI
AGSSDNAERATRRIADLRSDLGPEIRTLHVEITQQDPSVKPPANYDAALLADGLHYVETPDGTKHLTSLPQQAAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
XC_3019 YP_244087.1 HrpD5 protein Virulence Hrp PAI Protein 1e-104 100
hrpD5 NP_636597.1 HrpD5 protein Virulence Hrp PAI Protein 1e-104 100
hrpD5 NP_640754.1 HrpD5 protein Virulence Hrp PAI Protein 4e-83 68
unnamed AAP34352.1 HrpD5 Not tested Hrp PAI Protein 3e-83 68