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Name : XC_3012 (XC_3012) Accession : YP_244080.1 Strain : Xanthomonas campestris 8004 Genome accession: NC_007086 Putative virulence/resistance : Virulence Product : type III secretion system protein HrcU Function : - COG functional category : N : Cell motility COG ID : COG1377 EC number : - Position : 3605566 - 3606639 bp Length : 1074 bp Strand : + Note : - DNA sequence : ATGTCGGATGAGAAGACCGAGAAGCCGACAGAAAAGAAACTGCAGGATGCGCGCAGGGATGGGGAAGTCCCGATCAGCCC GGACGTCACTGCCGCCGCAGTGCTGCTGGCCGCGCTGCTGGTGATGAAGCTGGCAGGCAGCTATTTTGTCGAACATCTGC GTGCATTGATGTCGATCGGTTTCGACTTCACCACCAATACGCGCGATGCCACCGCCTTGCACCGTGCGCTCGGTCGCATC GGCATCCAGGGTGTCTTGCTGACGCTGCCCTTCGTGACGGCCTGCCTGGCCGCAGGATTGATCGGCACCTTTGTGCAGAC CGGGCTTAATGCCTCGCTCAAACCGGTCACGCCCAAATTCGATTCGCTCAACCCCGTCAACGGCGTCAAAAAACTTTTTT CGTTACGCAGTCTCATCAACCTGCTGAAGCTGGGCATCAAGGCGGCCGTGATCGGCGTGGTGCTGTGGTACGGCCTTCGT GCACTCATGCCGACCATCATCGGGCTCGCCTACCAGCCACCGGCCGACATCGCCCAGATCGGCTGGCGCGCACTGGGCAT TTTGTGCGCCCTGGCGGTCCTGGTGTTCGTGCTGGTCGGCGCGGCGGACTGGAGCGTGCAGCATTGGTTGTTCATTCGCG ACAAGCGCATGAGCAAGGACGAGCAGAAGCGCGAACACAAGGAGAGCGAAGGCGACCCGGAAGTGAAGGGAAAGCGCAAG GAATTCGCCAAGGAACTGGTCTTCGGCGACCCGCGCGAGCGCGTTGCCAAGGCCAAGGTGATGGTGGTCAACCCGACCCA TTACGCCGTCGCGCTCGCCTACGAACCGGACGGCTTCGGTCTGCCGCAGGTGGTTGCCAAGGGCGTGGACGAGGGCGCAC TGGAACTGCGTGCCTATGCGCACAACCAGGGCATTCCGATCGTGGCGAACCCGCCGTTGGCACGTGCGCTGCATGAGGTC GAACTGGGCGAGGCGGTTCCCGAATCGCTGTTCGAAACGGTGGCGGTGGTGCTGCGCTGGGTCGATGAACTGGGCCGCGA CAACGATGAAGGCAGCGGTCCGCTGCCCTGCTAG Protein sequence : MSDEKTEKPTEKKLQDARRDGEVPISPDVTAAAVLLAALLVMKLAGSYFVEHLRALMSIGFDFTTNTRDATALHRALGRI GIQGVLLTLPFVTACLAAGLIGTFVQTGLNASLKPVTPKFDSLNPVNGVKKLFSLRSLINLLKLGIKAAVIGVVLWYGLR ALMPTIIGLAYQPPADIAQIGWRALGILCALAVLVFVLVGAADWSVQHWLFIRDKRMSKDEQKREHKESEGDPEVKGKRK EFAKELVFGDPRERVAKAKVMVVNPTHYAVALAYEPDGFGLPQVVAKGVDEGALELRAYAHNQGIPIVANPPLARALHEV ELGEAVPESLFETVAVVLRWVDELGRDNDEGSGPLPC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcU | NP_636604.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 2e-149 | 100 |
| XC_3012 | YP_244080.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 2e-149 | 100 |
| hrcU | AAP34345.1 | HrcU | Virulence | Hrp PAI | Protein | 8e-127 | 83 |
| hrcU | NP_640761.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 2e-129 | 83 |
| hrcU | BAB07858.1 | HrcU | Virulence | Hrp PAI | Protein | 8e-129 | 82 |
| hrcU | YP_362157.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 1e-129 | 82 |
| hrcU | YP_198724.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 8e-130 | 82 |
