Gene Information

Name : XC_3011 (XC_3011)
Accession : YP_244079.1
Strain : Xanthomonas campestris 8004
Genome accession: NC_007086
Putative virulence/resistance : Virulence
Product : HrpB1 protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3604898 - 3605353 bp
Length : 456 bp
Strand : -
Note : -

DNA sequence :
ATGGAAAAGATTGAATGTCCCGGTTCGGTCGTGAGCGGGCTGATCGAACTGATCACGGTCGGGCTGACCCACGAAAAAAT
CGAAGAGGCCGCAGCGGTGCTGGCCGCCGTGCGAGTACTGCGGCCAGAGTTGAAGGCGCTGGATACCTTCGATGCCTGGA
TTGCGATCAAGCGCGGCAGTTATCTGGAGGGCGCGCGCCTGCTGCGTGAGCTGGAGGCCGATGCGGGCTCCGAGCCGTTG
TGCAAGGCCTTGTACGCGTGTTGCCTGTTTGCGGTGGGCGACCCGTCCTGGCATGGCATTGCAGAGGGCCTGATCGAAGA
GGACGCCGATGCCGACGCCGTTGGACTGGTCAAGGCGCTGTCAGGACGCTACACCCCGGCACCCGCGCCGCTGGAAGCGG
CGGCCGAATCCGCCGCGCCGATGGACGTTCCCAACGCCCAGTATCTGCGCGCCTGA

Protein sequence :
MEKIECPGSVVSGLIELITVGLTHEKIEEAAAVLAAVRVLRPELKALDTFDAWIAIKRGSYLEGARLLRELEADAGSEPL
CKALYACCLFAVGDPSWHGIAEGLIEEDADADAVGLVKALSGRYTPAPAPLEAAAESAAPMDVPNAQYLRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
XC_3011 YP_244079.1 HrpB1 protein Virulence Hrp PAI Protein 2e-41 100
hrpB1 NP_636605.1 HrpB1 protein Virulence Hrp PAI Protein 2e-41 100
hrpB1 YP_362158.1 HrpB1 protein Virulence Hrp PAI Protein 8e-40 85
hrpB1 AAB08456.1 HrpB1 Virulence Hrp PAI Protein 6e-40 85
hrpB1 AAF61286.1 HrpB1 Virulence Hrp PAI Protein 3e-40 84
hrpB1 NP_640762.1 HrpB1 protein Virulence Hrp PAI Protein 3e-39 84
hrpB1 YP_198725.1 protein HrpB1 Virulence Hrp PAI Protein 5e-40 84
hrpB1 AAP34344.1 HrpB1 Virulence Hrp PAI Protein 2e-39 84
hrpB1 BAB07857.1 HrpB1 Virulence Hrp PAI Protein 3e-40 84