Gene Information

Name : XC_3010 (XC_3010)
Accession : YP_244078.1
Strain : Xanthomonas campestris 8004
Genome accession: NC_007086
Putative virulence/resistance : Virulence
Product : HrpB2 protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3604474 - 3604866 bp
Length : 393 bp
Strand : -
Note : -

DNA sequence : 
ATGGCGCTCATTCCTCCTGTTGTACCGATCACTGCAAGTACCGGCCTGTCCACGCCTGCGGTATCGCCGACGGCCGCACC
GAACCAGTCGCTCGTCAATCGCTTCCAGGCGCTGATGCAATCCTCCTGCCCGCTGCCGCCTGCCATGCAGCGCGTGGGAG
AGCCGAGCATGATCAGCCGCATGGTGGACATGCAGAACGACGGCGTGCGGGCCATGACCGAGCATGTTGATGCGTTCGGC
GCCAATGCGCCAAAGATGGGGCTGGAGGAAATTGCGGCTGAGGAAATGAAGTTGATTAACGAGCTGACGATGGTCGGTTT
CAACCTCAACGTCAGCGTCAGCCTGGCACAGTCCGGCAAGAACGCCGTGCAGACACTGTTCAAGAACCAATAG

Protein sequence : 
MALIPPVVPITASTGLSTPAVSPTAAPNQSLVNRFQALMQSSCPLPPAMQRVGEPSMISRMVDMQNDGVRAMTEHVDAFG
ANAPKMGLEEIAAEEMKLINELTMVGFNLNVSVSLAQSGKNAVQTLFKNQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
XC_3010 YP_244078.1 HrpB2 protein Virulence Hrp PAI Protein 4e-56 100
hrpB2 NP_636606.1 HrpB2 protein Virulence Hrp PAI Protein 4e-56 100
hrpB2 AAP34343.1 HrpB2 Virulence Hrp PAI Protein 1e-42 73
hrpB2 NP_640763.1 HrpB2 protein Virulence Hrp PAI Protein 1e-42 73
hrpB2 BAB07856.1 HrpB2 Virulence Hrp PAI Protein 5e-43 72
hrpB2 AAF61285.1 HrpB2 Virulence Hrp PAI Protein 5e-43 72
hrpB2 YP_198726.1 protein HrpB2 Virulence Hrp PAI Protein 8e-43 72
hrpB2 YP_362159.1 HrpB2 protein Virulence Hrp PAI Protein 6e-43 71
hrpB2 AAB08457.1 HrpB2 Virulence Hrp PAI Protein 1e-42 70