|
Name : XC_3003 (XC_3003) Accession : YP_244071.1 Strain : Xanthomonas campestris 8004 Genome accession: NC_007086 Putative virulence/resistance : Virulence Product : HrcC protein Function : - COG functional category : N : Cell motility COG ID : COG1450 EC number : - Position : 3597742 - 3599559 bp Length : 1818 bp Strand : - Note : - DNA sequence : ATGGCATACGCCTGTCCTCCAGTTCACCGCCATCGACGCGCGCCGTTGGCCGCTGCCTTGTTGCTTGGCTTGCTGCCGCT GCTGCCGCCGCATGCCAACGCCGCGTCGGTGCCGTGGCACTCGCGCAGCTTCAAATACGTTGCCGACCGCAAGGATCTCA AGGAGGTGCTGCGCGACCTGTCCGCCAGCCAATCCATCACCACCTGGATTTCACCGGAGGTGACCGGCACGCTCAGTGGC AAATTCGAAGCCACTCCGCAGAAGTTTCTCGACGATCTATCGGGCACGTTCGGTTTTGTCTGGTATTACGATGGCTCGGT GCTCAGAATCTGGGGCGCGAACGAGACCAAGAATGCGACCTTGAGTTTGGGCGCTGCATCGACGAGTGCGCTGCGCGATG CGCTTGCGCGCATGCGGCTGGACGATCCGCGCTTTCCGGTCCGTTATGACGAGACAGCGCACCTGGCGGTGGTGTCGGGC CCGCCGGGTTATGTGGATACCGTCGCGGCGATCGCCAAGCAGGTCGAGCAGGTCGCGCGCCAACGCGACGCCACCGAAGT GCAGGTGTTTCAGCTGCATTATGCGCAGGCGGCCGACCACACCACCCGCATCGGTGGTCAAGACATCCAGGTGCCGGGCA TGGCCAGCCTGTTGCGCAACATATACGGCGTGCGTGGCGCGCCCACTGCGGCGCTGCCCGGGCCAGGCGCGAATTTCGGG CGTGTGCAACCGATCGGCGGTGGCTCGTCCAATACCTTCGGCAACAGCGGTCAGCGCCAGAGTGGCGGCAGCGGCATTCT CGGTTTGCCTGCGTCGTGGTTCGGCGCTGGGTCGCCGTCCGAGCGGGTGCCGGTCAGTCCGCCGTTGCCGGGCAGTGGCA ATAGCGCCAATGCGCCGGCCAGCGTGTGGCCGGAGATGAGCCAGGCCAGACGCGATGCGCCGCTGGCGGTGGACGCCGGC AGCGGCGGTGAGCTGGCATCCGACGCGCCGGTGATCGAAGCCGACCCGCGCACCAACGGCATTCTCATTCGCGACCGCCC CGAGCGGATGGCCGCCTATGGCACGTTGATCCAGCAGCTCGACAACCGTCCCAAGCTGCTGCAGATCGATGCCACCATCA TCGAGATCCGCGACGGCGCCCTGCAGGATCTCGGCGTGGACTGGCGGTTCCACAGCCGGCGTGTGGATGTGCAGACCGGC GACGGGCGTGGTGGCCAGCTTGGCTACGATGGCAGCTTGAGCGGTGCAGCAGCCGCCGGTGCAGCCGCGCCGTTGGGCGG GACGTTGACCGCTGTCCTGGGCGATGCAGGGCGTTACCTGATGACGCGCGTCTCGGCGCTCGAGCAGACCAACAAGGCCA AGATCGTCTCCACCCCGCAGGTGGCGACGCTGGACAACGTGGAAGCGGTGATGGACCACAAGCAACAGGCATTCGTGCGT GTCAGCGGTTATGCATCCGCCGACCTCTACAACCTGTCCGCGGGTGTATCGCTACGCGTATTGCCAAGTGTGGTGCCGGG GTCGCCAAATGGTCAGATGCGCCTGGATGTGCGTATCGAAGACGGGCAGTTGGGCGCCAATACCGTCGATGGCATTCCCG TCATCACCTCCAGCGAGATCACCACGCAGGCCTTCGTCAACGAGGGCCAGAGCCTGCTGATCGCCGGTTATGCTTCCGAC ACCGATCAGACAGATCTGAACAACGTCCCCGGGCTGTCCAGGATTCCATTGGTCGGCAACCTGTTCAAGCATCGCCAGCA GAGCGGGTCGCGGTTGCAGCGGTTGTTCCTGCTGACCCCGCATATCGTCTCGCCCTGA Protein sequence : MAYACPPVHRHRRAPLAAALLLGLLPLLPPHANAASVPWHSRSFKYVADRKDLKEVLRDLSASQSITTWISPEVTGTLSG KFEATPQKFLDDLSGTFGFVWYYDGSVLRIWGANETKNATLSLGAASTSALRDALARMRLDDPRFPVRYDETAHLAVVSG PPGYVDTVAAIAKQVEQVARQRDATEVQVFQLHYAQAADHTTRIGGQDIQVPGMASLLRNIYGVRGAPTAALPGPGANFG RVQPIGGGSSNTFGNSGQRQSGGSGILGLPASWFGAGSPSERVPVSPPLPGSGNSANAPASVWPEMSQARRDAPLAVDAG SGGELASDAPVIEADPRTNGILIRDRPERMAAYGTLIQQLDNRPKLLQIDATIIEIRDGALQDLGVDWRFHSRRVDVQTG DGRGGQLGYDGSLSGAAAAGAAAPLGGTLTAVLGDAGRYLMTRVSALEQTNKAKIVSTPQVATLDNVEAVMDHKQQAFVR VSGYASADLYNLSAGVSLRVLPSVVPGSPNGQMRLDVRIEDGQLGANTVDGIPVITSSEITTQAFVNEGQSLLIAGYASD TDQTDLNNVPGLSRIPLVGNLFKHRQQSGSRLQRLFLLTPHIVSP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| XC_3003 | YP_244071.1 | HrcC protein | Virulence | Hrp PAI | Protein | 0.0 | 100 |
| hrcC | NP_636613.1 | HrcC protein | Virulence | Hrp PAI | Protein | 0.0 | 100 |
| hrcC | NP_640770.1 | HrcC protein | Virulence | Hrp PAI | Protein | 0.0 | 86 |
| hrpA1 | AAB08464.1 | HrpA1 | Virulence | Hrp PAI | Protein | 0.0 | 85 |
| hrcC | AAP34336.1 | HrcC | Virulence | Hrp PAI | Protein | 0.0 | 85 |
| hrcC | YP_362166.1 | HrcC protein | Virulence | Hrp PAI | Protein | 0.0 | 85 |
| hrpA | BAB07849.1 | HrpA | Virulence | Hrp PAI | Protein | 0.0 | 84 |
| hrpA | AAC95122.2 | HrpA | Virulence | Hrp PAI | Protein | 0.0 | 84 |
| hrcC | YP_198733.1 | hypothetical protein | Virulence | Hrp PAI | Protein | 0.0 | 84 |
