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Name : XC_2640 (XC_2640) Accession : YP_243709.1 Strain : Xanthomonas campestris 8004 Genome accession: NC_007086 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 3178560 - 3179840 bp Length : 1281 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTAGATCCGGCCCTGCTTCGCCAACATCCCGCCGACCTTGCCGAGCGCCTGCGCAGCACGCGCGGCTTCGACTTGAA CACTGCGGAACTGGAGTCGCTGGAGAGCGAGCGCAAGCGGATCCAGGTGCGCACGCAGGAGCTGCAGAGCCTACGCAATT CCAAGTCCAAGGCGATCGGCCAGGCCAAGGCCAAGGGCGAAGACGTGGCGGCGTTGATGGCCGAAGTGGCCGGCTTTGGC GATGAGCTCAAGGCATCGGAAGACGCACTGGATGTCATCCGCGCGCAGCTGGAAGGCATTGCACTGGGCATTCCCAACTT GCCGGCCGCCAATGTGCCCGCGGGCAAGGACGAGAGCGAGAACGTCGAGCAGGCGCGCTGGGGCACGCCGCGGCAGTTCG ATTTTGCGGTCAAGGATCATGTCGAACTCGGCGCGCCGCACGGCTGGCTGGACGGCGAAACCGCAGCCAAGTTGTCCGGC GCGCGTTTCACCGTGCTGCGTGGCCCGATCGCCCGCCTGCACCGTGCGCTGGCGCAATTCATGCTTGACCTGCATGTGGG CGAGCATGGCTACGAAGAAACCAACGTGCCGCTGCTGGTCAACGCCGATTCGATGCGCGGCACCGGCCAGTTGCCGAAGT TCGAAGACGACCTGTTCCAGACCGAAGTGGGCGATTCGAAGCGTTATCTGATTCCCACATCCGAAGTGCCGCTGACCAAT ATCGTGCGCGATGCCATCGTCGACGCCGAGCGCCTGCCGCTGCGCATGACCGCCCATTCGATGTGCTTCCGCGCCGAAGC GGGCAGCGGTGGCCGCGACACCCGCGGCATGATCCGCCAGCACCAGTTCGAGAAAGTGGAACTGGTCACCGCGTGCAGCC CGGAAGACAGCGAGGCCGAGCACCAGCGCATGACGCGCTGCGCCGAAGTGGTGCTGGAAAAACTGGGCCTGCCGTATCGC AAGGTGCTGCTGTGCACCGGCGACATGGGGTTTTCGGCGATCAAGACCTACGACCTGGAAGTGTGGCTGCCCTCGCAGGC GACTTATCGCGAGATCTCTTCGTGCTCCAACTGTGGTGATTTCCAGGCGCGGCGCATGCAGGCACGCTGGCGCAATCCGG CCAGCGGCAAGCCGGAGCTGCTGCACACGCTCAACGGCTCCGGCACCGCCGTGGGCCGCGCAATGATCGCAGTGATGGAG AACTACCAGAACGCCGATGGCTCGATTGACGTGCCGGACGCACTGCGCCCGTACATGGGCGGGCTGGAGCGGATTGGCTG A Protein sequence : MLDPALLRQHPADLAERLRSTRGFDLNTAELESLESERKRIQVRTQELQSLRNSKSKAIGQAKAKGEDVAALMAEVAGFG DELKASEDALDVIRAQLEGIALGIPNLPAANVPAGKDESENVEQARWGTPRQFDFAVKDHVELGAPHGWLDGETAAKLSG ARFTVLRGPIARLHRALAQFMLDLHVGEHGYEETNVPLLVNADSMRGTGQLPKFEDDLFQTEVGDSKRYLIPTSEVPLTN IVRDAIVDAERLPLRMTAHSMCFRAEAGSGGRDTRGMIRQHQFEKVELVTACSPEDSEAEHQRMTRCAEVVLEKLGLPYR KVLLCTGDMGFSAIKTYDLEVWLPSQATYREISSCSNCGDFQARRMQARWRNPASGKPELLHTLNGSGTAVGRAMIAVME NYQNADGSIDVPDALRPYMGGLERIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-97 | 54 |
