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Name : XC_2263 (XC_2263) Accession : YP_243338.1 Strain : Xanthomonas campestris 8004 Genome accession: NC_007086 Putative virulence/resistance : Virulence Product : flagellar protein Function : - COG functional category : N : Cell motility COG ID : COG1157 EC number : - Position : 2724866 - 2726242 bp Length : 1377 bp Strand : + Note : - DNA sequence : GTGAGCGCCTTGTTGGGAGCCACCCCGGCCGATTGGCTGGATGCACGCAATCTGCGCCTGGCCACCCGTCTGGGCGGGCT GGGCCTGGACCCGGCCGCCGGCCGCACCCTGATCCGCGAAGGCATCCTGCGCCGCGCGGTGGGCCTGACCCTGGAAGCCA CCGGCTGCGAAGCGCCGATGGGCGCCACCTGCAAGGTGGAAGTCGATGGCGGCTGGGTCGACGCCGAAGTGGTCGGTTTT TCCGGCGAACGCACCTATCTGATGCCCAGCGCCGAACTGCACGGCCTGCTGCCCAACGCCCGCGTGGTGCCCTCGCGGCG CCGCGGCGGCGTGGAAGTGGGCGAAGGCCTGCTCGGCCGCGTCATCGACAGCGACGGCACCCCGCTGGACGGCAAGGGCC CGATCCGCGCCGAAGGCAGCGTGGGCATGGCCGGCGTGTCGATCAACCCGCTGGCGCGCGAACCCATCACCACCTCGCTG GACGTGGGCGTGCGCGCCATCAACGCGATGCTGCCCATCGGCCGCGGCCAGCGCGTGGGTCTGTTCGCCGGCTCCGGCGT CGGTAAATCGACGCTGCTCGGCATGATGACCCGCTTCACCTCCGCCGACGTCATCGTGGTGGGGCTGATCGGCGAACGTG GCCGCGAAGTGCGCGACTTCGTCGAAACCACCCTGGGCGAGGAAGGCCTGCGCCGCGCCGTGGTCGTGGCCGCCCCGGCC GACCGCCCGCCGCTGGCCCGCCTGCACGGCGCCTACCGCGCCACCGCGATTGCGGAATGGTTCCGCGATCAGGGCTTGAA CGTACTGCTGCTGATGGATTCGCTGACCCGTTTTGCGCAGGCCCAGCGCGAGATCGGCCTGTCGGTCGGCGAGCCGCCCA CCACCCGCGGCTACCCGCCGTCGGTGTTCGCCAAATTGCCGGCGCTGGTGGAACGTGCCGGCAACGGCGCCAAGGGCCGC GGCTCGATCACCGCCTTCTACACCGTGCTGACCGAAGGCGACGACCCGCAGGACCCGATCGCCGACGCCGCCCGCGCCAT CCTGGACGGCCACATCCTGCTTTCGCGCCGGGTTGCCGACAGCGGCCTGTACCCGGCCATCGACCTGGAATCCTCGGTCA GCCGCGTGGTGCAGGACATTGCCAACGACACCTGGCGCCTGCGCATCCGCAAGCTCAAGCGCCTGCTGTCGGCCTACACC GCCAACCGCGACCTGATCGCCATCGGCGCCTACCAGCGCGGCAGCGACCCGGCCACCGACGAAGCGTTGGCGCGCTGGCC GGAAATTGTCGACTTCCTTGGCCAGGACGTGCACAAGGCGTCCGATCTGACCGACAGCCTGTCCGCGCTGCAGCGGCTGG TGGAACCAGAGAACTAA Protein sequence : MSALLGATPADWLDARNLRLATRLGGLGLDPAAGRTLIREGILRRAVGLTLEATGCEAPMGATCKVEVDGGWVDAEVVGF SGERTYLMPSAELHGLLPNARVVPSRRRGGVEVGEGLLGRVIDSDGTPLDGKGPIRAEGSVGMAGVSINPLAREPITTSL DVGVRAINAMLPIGRGQRVGLFAGSGVGKSTLLGMMTRFTSADVIVVGLIGERGREVRDFVETTLGEEGLRRAVVVAAPA DRPPLARLHGAYRATAIAEWFRDQGLNVLLLMDSLTRFAQAQREIGLSVGEPPTTRGYPPSVFAKLPALVERAGNGAKGR GSITAFYTVLTEGDDPQDPIADAARAILDGHILLSRRVADSGLYPAIDLESSVSRVVQDIANDTWRLRIRKLKRLLSAYT ANRDLIAIGAYQRGSDPATDEALARWPEIVDFLGQDVHKASDLTDSLSALQRLVEPEN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| XC_3006 | YP_244074.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 1e-69 | 50 |
| hrcN | NP_636610.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 1e-69 | 50 |
| hrpB6 | BAB07852.1 | HrpB6 | Virulence | Hrp PAI | Protein | 8e-72 | 50 |
| hrpB6 | AAF61281.1 | HrpB6 | Virulence | Hrp PAI | Protein | 8e-72 | 50 |
| hrcN | YP_198730.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 1e-71 | 50 |
| lscN | AAO18044.1 | LscN | Virulence | TTSS locus | Protein | 2e-65 | 50 |
| hrcN | YP_362163.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 2e-70 | 49 |
| hrpB6 | AAB08461.1 | HrpB6 | Virulence | Hrp PAI | Protein | 1e-70 | 49 |
| hrcN | NP_640767.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 2e-71 | 49 |
| hrcN | AAP34339.1 | HrcN | Virulence | Hrp PAI | Protein | 2e-71 | 49 |
| ssaN | YP_216423.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 7e-59 | 49 |
| ssaN | NP_456113.1 | putative type III secretion ATP synthase | Virulence | SPI-2 | Protein | 2e-58 | 49 |
| ssaN | CAA70537.1 | secretion system apparatus | Virulence | SPI-2 | Protein | 6e-59 | 49 |
| ssaN | NP_805086.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 2e-58 | 49 |
| ssaN | NP_460380.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 8e-59 | 49 |
| hrcN | AAG33879.1 | HrcN | Virulence | Hrp PAI | Protein | 4e-55 | 45 |
| hrcN | ABA47275.1 | HrcN | Virulence | S-PAI | Protein | 2e-60 | 45 |
| hrcN | AAR25633.1 | type III secretion cytoplasmic ATPase HrcN | Not tested | Not named | Protein | 9e-52 | 45 |
| hrcN | NP_791227.1 | type III secretion cytoplasmic ATPase HrcN | Virulence | Hrp PAI | Protein | 6e-55 | 45 |
| hrcN | AAT96141.1 | HrcN | Virulence | T-PAI | Protein | 1e-55 | 45 |
| hrcN | AAT96195.1 | HrcN | Virulence | T-PAI | Protein | 1e-55 | 45 |
| hrcN | AAT96258.1 | HrcN | Virulence | S-PAI | Protein | 4e-55 | 45 |
| hrcN | AAT96299.1 | HrcN | Virulence | S-PAI | Protein | 2e-55 | 45 |
| hrcN | AAB06001.1 | HrcN | Virulence | Hrp PAI | Protein | 9e-55 | 45 |
| hrcN | AAT96339.1 | HrcN | Virulence | S-PAI | Protein | 5e-56 | 44 |
| invC | NP_461815.1 | ATP synthase SpaL | Virulence | SPI-1 | Protein | 1e-48 | 42 |
| invC | YP_217813.1 | ATP synthase SpaL | Virulence | SPI-1 | Protein | 1e-48 | 42 |
| spaI | NP_457288.1 | secretory apparatus ATP synthase (associated with virulence) | Virulence | SPI-1 | Protein | 1e-48 | 42 |
| spaI | NP_806497.1 | ATP synthase SpaL | Virulence | SPI-1 | Protein | 1e-48 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| XC_2263 | YP_243338.1 | flagellar protein | VFG1254 | Protein | 1e-98 | 60 |
| XC_2263 | YP_243338.1 | flagellar protein | VFG2499 | Protein | 1e-93 | 58 |
| XC_2263 | YP_243338.1 | flagellar protein | VFG2331 | Protein | 3e-88 | 57 |
| XC_2263 | YP_243338.1 | flagellar protein | VFG0192 | Protein | 9e-66 | 51 |
| XC_2263 | YP_243338.1 | flagellar protein | VFG0390 | Protein | 1e-67 | 50 |
| XC_2263 | YP_243338.1 | flagellar protein | VFG0515 | Protein | 3e-59 | 49 |
| XC_2263 | YP_243338.1 | flagellar protein | VFG0048 | Protein | 2e-67 | 48 |
| XC_2263 | YP_243338.1 | flagellar protein | VFG2144 | Protein | 1e-68 | 46 |
| XC_2263 | YP_243338.1 | flagellar protein | VFG0555 | Protein | 5e-49 | 42 |
