Gene Information

Name : XC_2258 (XC_2258)
Accession : YP_243333.1
Strain : Xanthomonas campestris 8004
Genome accession: NC_007086
Putative virulence/resistance : Virulence
Product : O-antigen biosynthesis protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG1216
EC number : -
Position : 2717231 - 2720842 bp
Length : 3612 bp
Strand : +
Note : -

DNA sequence :
TTGACGATCCCGATGCCCACTTCATTTGCTGCCACCGCCACTGCGCCGCGGGTCACCGTGGCGGTTCCCGCATACAGAGC
GACCTTCCTGAAAACCGCCCTGGACAGCGTGCTCGCGCAGGACATGCACGACCTGGAACTGCTGATCTGCGATGACTGTC
CGACCGATGCCGTCGCCGAGGTCGTGAAAAATTTCCTGGACTCGGAACACGGTGCGCAGATTCGCTATCTGCGCAACCCG
CAGCCGCTGCTGGAAGTGGGCAACTTCGGCCGATGCATCGCACAGGCACGTGGCACCTACCTCAAATTCCTCTGCGATGA
CGACGTGCTGCTGCCCGGTTGCCTAACCGCAATGGCCGACGTGCTCGACCGGCACCCGGAAGTAGCACTGGTCTCATCGC
GCCGCCAACTGATTGATGAGCGCGGCGCTCTGCTGCCGGAATCGGGCGCAAACGCAATTCCGTTCGAGGGCGATGTCTGT
GTGCACGGCCAGGAGCTGGTCTCCTTTCTGGCAGAGCGCACCTTGAACTTTATCGGCGAACCCAGCACGGTGATGTTCCG
CACCGCGCAGATGCGCCCCCATGCCGATGCGCCGTTCTCGCTGCAGGGGCGGCGTATCCAGTGGCTGGGCGACCTCACCA
TGTACGTCAATTTGCTGCGCAAGGGCCACCTGGCCATGTTGCAAAGTCCATTGTCGTGCTTCCGCATTTCCGCCGGACAG
GTCAGCAATGCCGCGCGTCTGAAGCCCGACATCGGCCGTGCCGGTTTCACCGCGTTCCGCACAGCTATTGGCGAACTGGG
CTGGCAGCGCGCCGTGGACAACCACCAGGTCGGGGTCAGGACGCTGGAGGGCGCGCAGCCCTTCGTTGCGCTGGATCTGG
GCGTGCGCGTGGATCGCATGCTTCGCGGTCTGCCGCCGGTTCTGCCGAGCAGTGGCGAGATCCTGCGCAATTGGCTGGAT
CAGCGCGTGCCCGACAACGCCCAGCACCGGCTGATCGAGGCGCGCTTTCAGGCCGCCGGCGGCGGCCCCCTGATCTGCAT
CGTGTTGCTGGATCGTCATGGCGACGCAGAGGCGATCGACGCCACCGTCCAGAGCCTGATCGCGCAGGCCTGCCAGTATT
CTCGGATACAGCTGCGTATCCTAAGCCCACTGGCCGTGGTCACGCCGCAAACAGCGCCGTTCTCGATCCAGCTGCACCGC
CACGAGGGCTCACTGGCGCAACTCGAGGCAATCAATGCGCTGTCCGCCACCGAGTCAGCCGACTGGCTACTGCCGGTCAA
GGCTGGCGCCACCTTCACCGCCTCGGGCCTGCTCACCGTCGCGCTGGATCTGCTCGGCGACGACAGCCTGCGCGCGGTCT
ATGCCGATGAAATGATCCGTGCCGAAGACGGCGAACTGTCGGCGCTGCTGCGTCCGGACTTCAACCTGGATCTGCTGCTG
TCGATGCCGGCCAGCATGGTCCGTAACTGGCTCTACAGGCGCGAGATCTTCGTTGCAGCCGGCGGACTGGACCCGGCGTT
GACCGACGCGGCGGAACTGGATCTGCTGCTGCGCCTGATCGACGCCGGTGGCCTTGACGGTCTGGGCCACGTCCACGAAC
CGCTGCTGGTGAGTCCCACTTCGCGCGTCTGGTCGCACCCGTCCGAGCAGCAGGCCTTGCTGCGTCACCTGCACCACCGC
AGCTACGCACAGGCAAAGATCCACAGCCACCTGCCCGGCTGCTATCGCATCGAGTACGGGCATGCGCACACGCCGGGGGT
GTCGATCATCGTCCCCACCAAGAACCAGCTCGGCATGCTGCAGCGCTGCGTGGAGACGCTGCTCGAAAAGACCGCCTATT
CCAACTACGAGCTACTGATCGTCGACAACGGCAGCACCGACGCCGACGCATGTCAGTGGCTGGATGGCATCGAAGCAATG
GACAGCCCGCAATTGCGCGTGCTGCGCTACCCGCATCCGTTCAACTATGCAGCCATGAACAACCTGGCGGCGCAGCATGC
CAGGGGCGAGTATCTGGTCCTGCTGAACAACGACACCGCGATCCTGCAGGAGAACTGGCTGGATGCGCTGCTCAACCACG
CGCAACGGCCGGAGGTGGGCGTGGTTGGCGCAAAGCTGCTGTATCCCAACGGCACCGTCCAGCACGCCGGCGTGGTGCTG
GGCTTGCGTGGACCCGCCGAGCATCCCTTCAACGGCCAGGCGCTGGATGCACCCGGTTACATGTACCGGCTGCAGGTGGA
TCAGAACTACAGTGCGGTCACAGGTGCATGCATGATGGTACGCGCCAGCCTCTACGCCGAAGTCGGTGGCCTGGACGAGG
ATGTTTTCAAGGTTTCCTACAACGATGTGGATCTGTGCCTGAAGATCCGTCAGGCCGGTTATCTGGTGGTCTGGACACCA
CATGCTGTGCTGCTGCATGAGGGCAGCGTCAGCCAGACACAGGTGGATACCGCCCCGCAGCTGGCCAAGGTGCAGCGCTT
CGAGGCCGAACAAGAGGCCATGTACCGCAAATGGCTCCCCTGGATCGCAAACGACCCGGCATACAACCGCAATCTGAACC
TGAATGGCGACGCCTTCCAGGTGGAAGATAACAACAGTCTGACCTGGCGCCCGTTGCGTTGGCGTCCGCTACCCACCGTG
CTGGCGATGACTGCAGACCAGACTGGCTGCGGCAACTACCGCATCATCCAGCCCGTGCACGCCATGCAGGCGGCCGGACT
GGCCGACGCGATCTGGTCGCTGCGCTACCTGTCGCCCGTGGAGATGCAGCGCCTCCAGCCCGAGACATTGGTGCTGCAAC
GGCAGATGTTTGATTACAACCTGGAGCCGCAGCAACGTGGCACCCGCTTCAGCAACTGCTTCAAGGTGGCGGAACTGGAC
GACTACCTGCCCAACGTGCCGCGCAAGAGCCTGCATCGTGATGCCATTCCCAACGACATCATGCGCAGCATGCGCAGATC
GTTGGCGATGGTGGACCGCTTCGTCGTCTCGACACCGGCGCTGGCGGAGGCATTGCACGGCCTGCACCGCGACACCCGGG
TCGTGGAGAACCGCCTGCCGCTACCGTGGTGGCGGGACCGGCAAGGCCAGCGCCGCCAGGGCAAGCGCCCGCGCGTTGGC
TGGGGCGGCGGCGGCGGCCACCAGGGTGACCTGGAAATGATCGAGGAAGTGATCAAGGCGCTGGCCACAGAGGTGGAGTG
GGTGTTCTTCGGCATGTGCCCGGAAAGCCTGCAGCCTTACGTCCACGAGTTCCACCCCGGCGTGCCTATCGATCTCTACC
CCGCAAAGCTGGCCGGACTGAACCTTGACCTGGCGCTGGCGCCGCTGGAAGACAACCTGTTCAATCAGTGCAAGAGCAAC
CTGCGCCTGCTGGAGTACGGTGCCTGCGGCTTCCCGGTGGTATGCAGCGACGTGCGCCCCTACCAGGGTTCGCTCCCTGT
GACCCGCGTGCGCCCGCGTTACCGGGACTGGGTTGAGGCAATCCGCATGCATACCCACGATCTGGACGCTGCCGCTGCCG
CCGGCGATGCACTGCGTGCGGCAGTACACCGCGACTGGATGCTGGACCAGGACCACGCTGCGCATTGGCTGACGCAGTGG
TTGCCCGACTGA

Protein sequence :
MTIPMPTSFAATATAPRVTVAVPAYRATFLKTALDSVLAQDMHDLELLICDDCPTDAVAEVVKNFLDSEHGAQIRYLRNP
QPLLEVGNFGRCIAQARGTYLKFLCDDDVLLPGCLTAMADVLDRHPEVALVSSRRQLIDERGALLPESGANAIPFEGDVC
VHGQELVSFLAERTLNFIGEPSTVMFRTAQMRPHADAPFSLQGRRIQWLGDLTMYVNLLRKGHLAMLQSPLSCFRISAGQ
VSNAARLKPDIGRAGFTAFRTAIGELGWQRAVDNHQVGVRTLEGAQPFVALDLGVRVDRMLRGLPPVLPSSGEILRNWLD
QRVPDNAQHRLIEARFQAAGGGPLICIVLLDRHGDAEAIDATVQSLIAQACQYSRIQLRILSPLAVVTPQTAPFSIQLHR
HEGSLAQLEAINALSATESADWLLPVKAGATFTASGLLTVALDLLGDDSLRAVYADEMIRAEDGELSALLRPDFNLDLLL
SMPASMVRNWLYRREIFVAAGGLDPALTDAAELDLLLRLIDAGGLDGLGHVHEPLLVSPTSRVWSHPSEQQALLRHLHHR
SYAQAKIHSHLPGCYRIEYGHAHTPGVSIIVPTKNQLGMLQRCVETLLEKTAYSNYELLIVDNGSTDADACQWLDGIEAM
DSPQLRVLRYPHPFNYAAMNNLAAQHARGEYLVLLNNDTAILQENWLDALLNHAQRPEVGVVGAKLLYPNGTVQHAGVVL
GLRGPAEHPFNGQALDAPGYMYRLQVDQNYSAVTGACMMVRASLYAEVGGLDEDVFKVSYNDVDLCLKIRQAGYLVVWTP
HAVLLHEGSVSQTQVDTAPQLAKVQRFEAEQEAMYRKWLPWIANDPAYNRNLNLNGDAFQVEDNNSLTWRPLRWRPLPTV
LAMTADQTGCGNYRIIQPVHAMQAAGLADAIWSLRYLSPVEMQRLQPETLVLQRQMFDYNLEPQQRGTRFSNCFKVAELD
DYLPNVPRKSLHRDAIPNDIMRSMRRSLAMVDRFVVSTPALAEALHGLHRDTRVVENRLPLPWWRDRQGQRRQGKRPRVG
WGGGGGHQGDLEMIEEVIKALATEVEWVFFGMCPESLQPYVHEFHPGVPIDLYPAKLAGLNLDLALAPLEDNLFNQCKSN
LRLLEYGACGFPVVCSDVRPYQGSLPVTRVRPRYRDWVEAIRMHTHDLDAAAAAGDALRAAVHRDWMLDQDHAAHWLTQW
LPD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fgtA AAK15339.1 flagellar glycosyl transferase Virulence Not named Protein 2e-145 45