Gene Information

Name : XC_2091 (XC_2091)
Accession : YP_243167.1
Strain : Xanthomonas campestris 8004
Genome accession: NC_007086
Putative virulence/resistance : Virulence
Product : polysaccharide biosynthetic protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0677
EC number : -
Position : 2515416 - 2516708 bp
Length : 1293 bp
Strand : +
Note : -

DNA sequence :
ATGTCCCGCACCCCGCCGTTCGACCCGCTTCAGGCGCACATTGCCGTCATCGGGCTTGGCTACGTCGGCCTGCCGCTGGC
CGTCGCGTTCGGTGAGCGGCGCGACACGCTGGGCTTCGATATCGATGCCCAGCGCGTGGCGCAGTTGCAGCAGGGCCACG
ATGCCACGCTGGAACTGGACGATGCAGAACTCGCCGCTGCAGGGCAGTTGCGCTACACCGCCGACGCTGCAGAACTTGCG
GGCTGCACGATCTTCATCGTCACCGTGCCCACGCCCATCGACAGTTTCGAACAGCCAGACCTGGAACCGCTGCGCAGTGC
CACCGTATTGATTGCCGCCGCACTCAAGCCAGGCGATCTGGTGATCTACGAATCGACCGTGTACCCCGGCACCACCGAAG
AAGTCTGCGTGCCGCTGCTCGAAGAAGCCTCCGGGCTGCGGTTCAACGCCGATTTCTTCTGTGGCTACAGCCCCGAGCGC
GTCAACCCGGGTGACCGGCAGCGGCGGCTGCGCGACATTCGCAAGATCACCTCGGGCTCCACCCCCGCCGCCGCCGACGC
GGTGGATGCGCTCTACGCCAGCATCATCACGGCCGGCACGTGGCGCGCTGGATCGATCCGCGTAGCCGAAGCGGCCAAGG
TGGTGGAGAACATTCAGCGCGACGTCAATATTGCGCTGGTCAACGAGCTGGCGCTGATTTTCGACAAGCTCGGCATCGAC
ACGCTCGATGTGCTCGAAGCCGCCGGCACCAAGTGGAATTTCCTCCCATTCCGGCCCGGTCTGGTCGGCGGGCATTGCAT
CGGTGTGGACCCGTATTACCTGCTGCACAAATCCGAGAGCGTGGGTTACCACCCGGATCTGATCCACACCGCGCGGCAGG
TAAACAATCGCGTTGGCCGTCACGTGGCCGAGCGCGTCTGCAGCTTGCTCGCGGCGCAAGGGATTGCACCACCGCAGGCG
CGGGTGCTGGTGCTCGGCGCCACCTTCAAGGAGAACTGCCCGGATCTGCGCAACAGCCGTGCCCTGGAACTGGTACAGCT
GCTGCAGGCCGCCGGCGCGCAGGTCGATACCTGCGACCCGTGGGCCGATCCCGAAGACGCGCTGCGCCACGGCGGCGTGC
AGCTGTGCGAGATGCCGGAAGAGGGCGCCTACGATGCCGTGGTTTTGGCGGTGGCGCACGCGCAGTACCGCGACTACGAT
GCGCAGCGCATCGCCGCACTCGGCAAGCCGGGCGCGGTGTTCTATGACGTCAAATCGGTGTGGCCGCGCGCGTCGGTCAA
CGCTCGGCTGTAG

Protein sequence :
MSRTPPFDPLQAHIAVIGLGYVGLPLAVAFGERRDTLGFDIDAQRVAQLQQGHDATLELDDAELAAAGQLRYTADAAELA
GCTIFIVTVPTPIDSFEQPDLEPLRSATVLIAAALKPGDLVIYESTVYPGTTEEVCVPLLEEASGLRFNADFFCGYSPER
VNPGDRQRRLRDIRKITSGSTPAAADAVDALYASIITAGTWRAGSIRVAEAAKVVENIQRDVNIALVNELALIFDKLGID
TLDVLEAAGTKWNFLPFRPGLVGGHCIGVDPYYLLHKSESVGYHPDLIHTARQVNNRVGRHVAERVCSLLAAQGIAPPQA
RVLVLGATFKENCPDLRNSRALELVQLLQAAGAQVDTCDPWADPEDALRHGGVQLCEMPEEGAYDAVVLAVAHAQYRDYD
AQRIAALGKPGAVFYDVKSVWPRASVNARL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 1e-104 52
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 1e-104 52
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 5e-88 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XC_2091 YP_243167.1 polysaccharide biosynthetic protein VFG0431 Protein 4e-105 52