Gene Information

Name : XC_2070 (XC_2070)
Accession : YP_243150.1
Strain : Xanthomonas campestris 8004
Genome accession: NC_007086
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2483259 - 2484902 bp
Length : 1644 bp
Strand : -
Note : -

DNA sequence :
ATGGCTGAGATGACGTCCCAAGACATGGCCGGCAAGCTGCTTGCAGCTGGGTTCGAGCGCAGCGGCCCATCGGCCACGGC
ATTGAGCGACCCAATCGCCGACACCCCGATGGTTGTGACGTTGGACCAGTTGCGGCCTTACGACCACGATCCCCGCAAAA
AGCGCAACTCGGCCTACGATGAAATCAAGGCCTCCATACGAGAGCGCGGCCTGGATGCGGCACCAGCCATCACACGCCGT
CCTGGCGACACGCACTACATCATCCGCAACGGTGGCAATACAAGGCTGGCGATCCTGCGTGAACTCTGGGCAGAGACGAA
GGACGAGCGCTTCTTCCGCATATCGTGCCTGTTCCGGCCCTGGCCTGCGCGCGGAGAAATCGTTGCGCTGACCGGACACC
TCGCCGAGAACGAGCTGCGCGGCGGCCTCACGTTCATCGAGCGCGCCTTGGGCGTCGAAAAAGCCCGCGAGTTCTATGAA
GAGGAAAGCGGCGCCACACTGAGCCAGTCCGAACTGGCCCGCCGCCTGGTCGCCGACGGCTACCCCGTACAGCAGTCGCA
CATCAGCCGCATGGCCGATGCGGTGCGTTACCTGCTGCCCGCGATTCCGACCGTGCTCTATGGCGGTCTGGGCCGCCACC
AGGTCGAGCGACTGTCGGTCATGCGCAAGGCCTGCGAGCGCACCTGGGAGTACTATGCCAAAGGCCGCTCCCTTCAATTG
GACTTCGACAACTTCTTTCAAGAGGTGCTGTCGCAGTTCGACACTCAGGCTGACGAATTCGCACCTCAGCGGGTGCAGGA
CGAGCTGATCGGTCAAATGTCCGAACTGCTGGGCGTCAATTACGACGTGCTGGCCTTGGACCTGACCGAATCCGAGAACC
GCTACCGTGTGCTGGTCAGCGACCCGACTCCGCCGTCGGCACCAACTGCGTTGCCTGACCCAGGAGCCATCGCACGGTCG
CCCGCCGGACCGGCGCCGTCCACCGATACGCCTTCGCCAACTAAAGCGCGGTCAGCGAGCGGCCCGCTCACGGGCGAGAA
TGATGCGACCGCTGGCAATGCATCCGCAGGAAGCCCAGCGGCAGCGGCTGGAGAGCTGCTGCAGGAGCATATCGTCTCGC
CGGCACCGACGACAGAGCGGCTCCAGTCCATCCAGCGGATGATCGCGGACCAGTTGGGTGATGCGCTACCGCCCGACTTC
TCAGCCCGCGTATTGCAGTCGATCCCGGTGCAAGCCGGTGGCCTCTATCCCATCTCCGACGTCTGGTACATCGACCCCGG
CCTGGAAGCGCCCGACCGGCTGCGCATCCATATCGCGCAATTCGCGCGCGAGATCGCCGGCGAGGCGGATTTGGACGAGT
TCATCGAGGACCGTCCCGACGGCATCGGGTTCGCATGTAGCGCCCAGGCCCCTTTGCCGCGTGGACACGCCGTGCTGGCG
CTGCTGGGGTCTCTGTCCGGTCAGCAGCCGACCGATACCAGCCCCTACGGGCAATTCGTCACCGATCTGCCGGCACTGCT
ACACGGTCAAGGCGATGTCACCAAGCGATTGAGCGATACCGCGCTGGTCAAGTTGTTCCGGTTGCTGCGGCTTGCCCGAC
GCCTGCTGGATTTGGGAGCCGGTGCCAGGGCTCCCGATTCTTGA

Protein sequence :
MAEMTSQDMAGKLLAAGFERSGPSATALSDPIADTPMVVTLDQLRPYDHDPRKKRNSAYDEIKASIRERGLDAAPAITRR
PGDTHYIIRNGGNTRLAILRELWAETKDERFFRISCLFRPWPARGEIVALTGHLAENELRGGLTFIERALGVEKAREFYE
EESGATLSQSELARRLVADGYPVQQSHISRMADAVRYLLPAIPTVLYGGLGRHQVERLSVMRKACERTWEYYAKGRSLQL
DFDNFFQEVLSQFDTQADEFAPQRVQDELIGQMSELLGVNYDVLALDLTESENRYRVLVSDPTPPSAPTALPDPGAIARS
PAGPAPSTDTPSPTKARSASGPLTGENDATAGNASAGSPAAAAGELLQEHIVSPAPTTERLQSIQRMIADQLGDALPPDF
SARVLQSIPVQAGGLYPISDVWYIDPGLEAPDRLRIHIAQFAREIAGEADLDEFIEDRPDGIGFACSAQAPLPRGHAVLA
LLGSLSGQQPTDTSPYGQFVTDLPALLHGQGDVTKRLSDTALVKLFRLLRLARRLLDLGAGARAPDS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C107 AAN62200.1 conserved hypothetical protein Not tested PAGI-2(C) Protein 0.0 79
ORF SG102 AAN62323.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 3e-152 63
pph07 CAI36048.1 hypothetical protein Not tested PPHGI-1 Protein 5e-114 47
unnamed ABR13448.1 hypothetical protein Not tested PAGI-5 Protein 7e-96 45
RL102 AAP84227.1 conserved hypothetical protein Not tested PAPI-1 Protein 7e-95 43