Gene Information

Name : XC_2068 (XC_2068)
Accession : YP_243148.1
Strain : Xanthomonas campestris 8004
Genome accession: NC_007086
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2481453 - 2482679 bp
Length : 1227 bp
Strand : -
Note : -

DNA sequence :
ATGGCCGTGGATGAAACAGCACCGCGAACACCACGCCAAGGCCCAGTAGCCCTCGCCGATTTGTTCGATAGTGCGCTGAA
AGACCTTGAGCCTAAACCTAGTGTGCCTGCGCCTGCTCCTATCCCTACATGCGGGGACGGTTTCCTTTTCAGCGGTAACC
GGCACGAGAGCGTGCCGCGGCGCCTGTTCCTGGATCGTCGGTTGACGCCACTGGAACGTAATGCCTGGCAAGTCTTCCGG
CTGATGCTCAACAACGACGGCGTGACGGCGTTCCCCACCTATGAGCAATTGCGCCCCTGGCTGGCATCGATGCCCAACGC
AGGAAAGGCTTCGCATGAAACCGTAGCACGTGCCTTGACGCTGTTGCGCCTGACACGCTGGTTGAGCCTCGTGCGCAGGC
GCCGCGATCCCAAGACCGGACGCATCCTCGGCAACCTCTATGTGCTGCACGATGAGCCCTTGACCCCATTCGAGGCTATG
CAGCTTGACACCGACTATCTGGAGCTGGTCAGCCAGTCACTGGGCCATTCTGCGAAGGCCGTGCAGATGGTGGGGCTCAA
CACCCTCAAGGAAATCGAGGAAGACCCGCTGCTGTCCGGCCGCACGTTGCCGTCGCGGTTGCAGGTGCTTGCCGAACGCC
TTGCCCAACAGGGCATCGCTGCCCCCGAGAGTTATCCACAAGAAGACTCCACCCACGATTCCGAAGAAAGGGTTTCGAAC
CTTCTTCGGAATGGCGAACAGCATTCTTCGGAATCCGAAGCAGGGCTGGAACCCACGCCGGACGGTGTTCTTCGGAATCC
GAAGCAGGACCGTACTGTACGTAGTAAAAGTAATAAAGAAATACGTACTACCGCGCGTGAACATGGGCATGTGCGCGCGA
TGCCAGGTGTTCGCATGCCTGATCGCTTCCTGAGCCTGAAGGAAGAGCAGCAGGCCGGCGCACTGGTGGCGTTACAGCAG
GTCGATGCGCCATTGAGGCAAGCCGTACTGGATGAATGGGCGGATCGCTGTCGAGGCTCGACCATTCGCAATCCCGCAGG
GTATTTGTTCGGCATCATCCAGCGCGCTATCCGGGGCGAGTTCAATGCATGGGCCAAGCAAGTCGGGACGGCACCACCGG
TACCTGCTGCGTATGATCGGCCACCGGAAGCACCACGTAACGTGGTTCCGACCGAAGTGGCTCTGCAGCACATCGAACGG
CTGCGCGAGCTTCTGCGTAAGGCCTGA

Protein sequence :
MAVDETAPRTPRQGPVALADLFDSALKDLEPKPSVPAPAPIPTCGDGFLFSGNRHESVPRRLFLDRRLTPLERNAWQVFR
LMLNNDGVTAFPTYEQLRPWLASMPNAGKASHETVARALTLLRLTRWLSLVRRRRDPKTGRILGNLYVLHDEPLTPFEAM
QLDTDYLELVSQSLGHSAKAVQMVGLNTLKEIEEDPLLSGRTLPSRLQVLAERLAQQGIAAPESYPQEDSTHDSEERVSN
LLRNGEQHSSESEAGLEPTPDGVLRNPKQDRTVRSKSNKEIRTTAREHGHVRAMPGVRMPDRFLSLKEEQQAGALVALQQ
VDAPLRQAVLDEWADRCRGSTIRNPAGYLFGIIQRAIRGEFNAWAKQVGTAPPVPAAYDRPPEAPRNVVPTEVALQHIER
LRELLRKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C105 AAN62198.1 conserved hypothetical protein Not tested PAGI-2(C) Protein 4e-126 79
ORF SG100 AAN62321.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 1e-93 64
pph09 CAI36050.1 hypothetical protein Not tested PPHGI-1 Protein 8e-43 46
RL100 AAP84225.1 conserved hypothetical protein Not tested PAPI-1 Protein 1e-44 41