Gene Information

Name : XC_2065 (XC_2065)
Accession : YP_243145.1
Strain : Xanthomonas campestris 8004
Genome accession: NC_007086
Putative virulence/resistance : Unknown
Product : single-stranded DNA-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 2479332 - 2479772 bp
Length : 441 bp
Strand : -
Note : binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA

DNA sequence :
ATGAGCACGCATTTTTGGGGCGAAGGCAACGTCGGCTCGCCACCCGAGTACCGCGAATTTCCCAACGGAAACGATGAACC
GCGCCGGCTGCTTCGCCTGAACGTTTACTTCGACAACCCCATTCCAAGAAAAGATGGCGAGTTCGAGGATCGCGGAGGCT
TTTGGGCGCCCGTCGAACTCTGGCACCGCGATGCCGAGCACTGGAAGGATCTTTACCAGAAAGGCATGCGCGTGCTCGTC
ATCGGCCGCATGGAGCGTGAACCGTGGACGGACAACGAGGATCAGCCACGCGAGACCTGGCAGATCAACGCACGCAGCGT
CGGCATCCTGCCCTACCGCATCGAATCCGTGGCCCTCAGTCCGAAGCCGCAGGAGGCAGAGCCGAAGCCCCAAGCCGCCC
AGGAATCGACTACGCCGAAAGACGCGAAGCGCAGGAAGTGA

Protein sequence :
MSTHFWGEGNVGSPPEYREFPNGNDEPRRLLRLNVYFDNPIPRKDGEFEDRGGFWAPVELWHRDAEHWKDLYQKGMRVLV
IGRMEREPWTDNEDQPRETWQINARSVGILPYRIESVALSPKPQEAEPKPQAAQESTTPKDAKRRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb AAN62195.1 putative single-stranded DNA binding protein Not tested PAGI-2(C) Protein 8e-60 87
ssb AAN62318.1 putative single-stranded DNA binding protein Not tested PAGI-3(SG) Protein 1e-43 70
ssb CAI36053.1 single-stranded DNA-binding protein Not tested PPHGI-1 Protein 2e-31 51
ssb AAP84220.1 single strand DNA binding protein Not tested PAPI-1 Protein 4e-25 50
unnamed ABR13438.1 single-stranded DNA-binding protein 2 Not tested PAGI-5 Protein 7e-26 47