Gene Information

Name : XC_2043 (XC_2043)
Accession : YP_243124.1
Strain : Xanthomonas campestris 8004
Genome accession: NC_007086
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2457301 - 2458023 bp
Length : 723 bp
Strand : -
Note : -

DNA sequence :
ATGAAACACTGTCCCGTTCTCATTCTATCGCTGCTGGCAGCGCTGCACCTGCCGGCTTCGGCCCAGCAGCCTGCCACCGC
TCAGTCCCGTAATATGCCCAACCAGGAGCGGCCCCTGGCAGGCCGCATCCTGGACGACCGCGTGGCGCGCGACTGGGGCC
TGCAACCGCAGGATTGGGCGCGCTACCGCGAGCTGATGGAGGGACCACTCGGCATCTACTCACCGAACCTGGACCCGCTA
TCGGCCTTGGGAATCGAGGCCCGCACCGACGAAGAGCGGCGGCGCTACGCAGAGTTGCAGGTGCAGGTCGAAGCGCGTCG
CGTGGAGAAGCTGCTGGCGTACCAGCGCGCCTACGACGAAGCCTGGCAGCGGCTGAACCCTGGCATGCAGCGCGTGAACC
TGCCCGATGACAAACCAGGCGCCGCCGTGCGCAGCAGCGGCCGCATGGCAGTATTCATTAAGGACGGCTGCGCCGCATGC
GGGCAGCTCGTGCAACGCCTGCAAACTTCGGGCACCGAGTTCGATCTGTACATGGTCGGCAGCCGACAGGAAGACGCGCG
TATCCGCGACTGGGCCAAGCGCGCGCAGATCGATCCAGCACGAGTGCGCAGCGGCAGCATCACGCTCAACCACGACGGCG
GCCGCTGGCTGTCACTCGGCCTAACCGGTGATCTGCCGGCCGCCGTGCGCGAGGTGAACGGTCAATGGCAGCGTCAGCCG
TAG

Protein sequence :
MKHCPVLILSLLAALHLPASAQQPATAQSRNMPNQERPLAGRILDDRVARDWGLQPQDWARYRELMEGPLGIYSPNLDPL
SALGIEARTDEERRRYAELQVQVEARRVEKLLAYQRAYDEAWQRLNPGMQRVNLPDDKPGAAVRSSGRMAVFIKDGCAAC
GQLVQRLQTSGTEFDLYMVGSRQEDARIRDWAKRAQIDPARVRSGSITLNHDGGRWLSLGLTGDLPAAVREVNGQWQRQP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C68 AAN62162.1 hypothetical protein Not tested PAGI-2(C) Protein 4e-89 90
ORF SG71 AAN62293.1 hypothetical protein Not tested PAGI-3(SG) Protein 5e-62 63
pph69 CAI36110.1 hypothetical protein Not tested PPHGI-1 Protein 9e-56 58
RL051 AAP84177.1 conserved hypothetical protein Not tested PAPI-1 Protein 4e-53 58
unnamed ABR13379.1 hypothetical protein Not tested PAGI-5 Protein 2e-53 58
EXA51 ABD94660.1 conserved hypothetical protein Not tested ExoU island A Protein 2e-54 56
PMI2592 YP_002152311.1 hypothetical protein Not tested Not named Protein 8e-31 44
t4256 NP_807854.1 hypothetical protein Not tested SPI-7 Protein 7e-31 41
STY4558 NP_458644.1 putative exported protein Not tested SPI-7 Protein 7e-31 41
Pmu_03220 YP_005176221.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 9e-29 41