Gene Information

Name : XC_2041 (XC_2041)
Accession : YP_243122.1
Strain : Xanthomonas campestris 8004
Genome accession: NC_007086
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2456169 - 2456717 bp
Length : 549 bp
Strand : -
Note : -

DNA sequence : 
ATGACGAAATCCCATCTGGCCCATCTCGCGGCGAAGGGCCTGCTCGTGCTGTTGGCGGGTCTGCCGCTGACCTCGCGTGC
CGGTGAGTCGCTGATCGTGGTCGAAGACCGTGGCGGCACGTCCGCGCTACCGTACTACGAAGCCCTGAACCTCCAACCGC
GTGTCAACTCCCCTGCCCGGCCGCAGATCCCGACGCCCCAGGTTCCCGCCACCCCCGCAGACGAGGCCGCGATGCTGCCG
GTGCGCAGCACCAAGCTCACGCCCGGCACCGTCGCGCGGCGAGTGATCGAGGCCCCTGGCCTTCGGCCTTTCGTGGTCGC
CGGCGACGACAAGGCTTCCCAAGACTGGCTGCGGCGCAATGCGGCCTCGTTGCACGAGCGCGGCGCGGTCGGCCTGGTGG
TCAATGTCGAGACCGTGCAGGCATTGGCGCGGCTACGCGCATTAGCGCCCGGCGTTCAAATGGCCCCCGTGGCCGGCGAC
GACCTGGCAGAGCGCTTGGGCCTGCGGCACTACCCGGCGCTGATCACCGCCACCAGCATCGAGCAATGA

Protein sequence : 
MTKSHLAHLAAKGLLVLLAGLPLTSRAGESLIVVEDRGGTSALPYYEALNLQPRVNSPARPQIPTPQVPATPADEAAMLP
VRSTKLTPGTVARRVIEAPGLRPFVVAGDDKASQDWLRRNAASLHERGAVGLVVNVETVQALARLRALAPGVQMAPVAGD
DLAERLGLRHYPALITATSIEQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C66 AAN62160.1 hypothetical protein Not tested PAGI-2(C) Protein 5e-61 87
ORF SG69 AAN62291.1 hypothetical protein Not tested PAGI-3(SG) Protein 5e-44 64
pph71 CAI36112.1 hypothetical protein Not tested PPHGI-1 Protein 3e-29 48
api26 CAF28500.1 hypothetical protein Not tested YAPI Protein 1e-24 47
YE3494 YP_001007652.1 hypothetical protein Not tested YAPI Protein 4e-23 46
EXA49 ABD94658.1 conserved hypothetical protein Not tested ExoU island A Protein 5e-29 46
unnamed ABR13377.1 hypothetical protein Not tested PAGI-5 Protein 4e-29 46
YpsIP31758_3719 YP_001402673.1 hypothetical protein Not tested YAPI Protein 1e-24 46
RL049 AAP84176.1 conserved hypothetical protein Not tested PAPI-1 Protein 4e-28 45
PMI2590 YP_002152309.1 hypothetical protein Not tested Not named Protein 5e-22 42