Gene Information

Name : XC_2034 (XC_2034)
Accession : YP_243115.2
Strain : Xanthomonas campestris 8004
Genome accession: NC_007086
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2450114 - 2451040 bp
Length : 927 bp
Strand : -
Note : -

DNA sequence :
ATGAAGCACCCTGTACTCGCGCTGCTGGGACTGCTGGCCGTGGCCTCGGCTCCCGTCGCCCAGGCCTTGGAGGTTATGCG
CTGGGAACGCATGCCGCTTGCGGTGGCGCTGAAGGTCGGCCAGGAACGCATCGTGTTTATCGACCGGAACGTCCGCGTGG
GCGTGCCTGCGGGTGTGGGCGAGCGCCTGCGCGTGCAGAGCGCGGGCGGCGCGGTGTATCTGCGCGCGAACGAGCCGATC
GAACCCACGCGGCTGCAACTGCAAGACACCGACACCGGGGCATTGATCCTGCTGGACATTGCTGCCGAGCCGGCCAAGGG
TGGCGAGCCTGCGCTGGAGCCGGTGCGCATCGTCGAGGGCGATGTGCCCTCCGCGCGCTCCGGCGATCAGCCGACCGATG
CCGACGAAGTGCCAGCACCCGCCAATCGCCAGGCGGCCGCGCAGTCAGCCCGGCGCGAAACGCCAATCTCGGTAGTCCTT
ACACGCTTTGCCGCGCAGAACCTATACGCACCGCTGCGCACGGTCGAGCCGCTGCCGGGCGTCATGCGGGTCAACCTGCG
CCGTGACCTGGACCTCGGCACCTTGATTCCGACACTGCCGGTGCGCGCCACCGCACTCGCCTCGTGGCGGCTGGAAGACC
AATGGGTGACGGCCGTGCGCCTCACCAACACCGACGCCGGCTGGATCACGCTAGACCCGCGCGTGCTGCAAGGCGATTTC
CTCACTGCCACCTTCCAGCATGAGGCACTCGGCCCGCGCGGCACGCCCGAGGACACCACCGTCCTGTACCTGATGACGCG
CGGGCGAGGCATCACGCAGTCGCTTTTGCCCGCCCTCCACCGCTTCGACCCGGCCACGCATTTGCCGCAGCCGGAAGCCA
GCGTCGAGGATCCGAAGGACGGCAAGGAGGCTCCCCATGCGCAGTAA

Protein sequence :
MKHPVLALLGLLAVASAPVAQALEVMRWERMPLAVALKVGQERIVFIDRNVRVGVPAGVGERLRVQSAGGAVYLRANEPI
EPTRLQLQDTDTGALILLDIAAEPAKGGEPALEPVRIVEGDVPSARSGDQPTDADEVPAPANRQAAAQSARRETPISVVL
TRFAAQNLYAPLRTVEPLPGVMRVNLRRDLDLGTLIPTLPVRATALASWRLEDQWVTAVRLTNTDAGWITLDPRVLQGDF
LTATFQHEALGPRGTPEDTTVLYLMTRGRGITQSLLPALHRFDPATHLPQPEASVEDPKDGKEAPHAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C50 AAN62144.1 hypothetical protein Not tested PAGI-2(C) Protein 3e-103 83
ORF SG60 AAN62282.1 hypothetical protein Not tested PAGI-3(SG) Protein 6e-70 63
pph81 CAI36122.1 hypothetical protein Not tested PPHGI-1 Protein 1e-70 57
unnamed ABR13365.1 hypothetical protein Not tested PAGI-5 Protein 8e-67 56
EXA36 ABD94645.1 conserved hypothetical protein Not tested ExoU island A Protein 3e-67 56
RL025 AAP84152.1 conserved hypothetical protein Not tested PAPI-1 Protein 4e-67 55
api36 CAF28510.1 hypothetical protein Not tested YAPI Protein 5e-53 50
YpsIP31758_3708 YP_001402662.1 hypothetical protein Not tested YAPI Protein 6e-53 50
STY4569 NP_458654.1 hypothetical protein Not tested SPI-7 Protein 1e-50 50
t4266 NP_807864.1 hypothetical protein Not tested SPI-7 Protein 1e-50 50
YE3485 YP_001007644.1 hypothetical protein Not tested YAPI Protein 3e-52 49
PMI2580 YP_002152299.1 hypothetical protein Not tested Not named Protein 2e-53 48
Pmu_03100 YP_005176209.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 3e-47 46