Gene Information

Name : XC_2033 (XC_2033)
Accession : YP_243114.1
Strain : Xanthomonas campestris 8004
Genome accession: NC_007086
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG4372
EC number : -
Position : 2448694 - 2450124 bp
Length : 1431 bp
Strand : -
Note : -

DNA sequence :
ATGCGCAGTAACGGACTCCTGAAGTGGCTGATGATTCCTGTGGCCCTGCTGGTGCTGTTCTTCGGCATTCGGCTGTTCTC
GGGCGGAGGGTCGTCGGCACCCTCGCAAGCCGAGACGGGTAGCCAACTCACGCCCGAAGAAATGAAGGCATTGGGCATTG
CAGGCGATACCCCGCGCGACACCGTGGCAACGCTCGTCGCCCAGGTAAAGCAACTGCGCACCGAGCTTCAGACCGCGCTG
TCTGATAACAAGTCCCAGCGCGAGGAGAACCAGCGGCTGCGCCAGCGCGAGAACTCGATCGACCAGCGCATCAACTCGGC
GCTGGAGACCGAGCGCTCCAACCTGCGCCGCGACCAGCAACAGGCGGCCAGTGAACGCCAGCAGACCGAGGGCCTGCTCG
CCGACTTGCAGCAGCGTCTGGACAGCATCGGCGGACGCGGGGGCGGCCATACAGATATGCCTGTGGGCCTGGGGCTGCGC
GACGGCGACGAGGCCGGAATGGAAGGCGGCATGCGCTGGGTGGATCCAGACGATAAGAAGCCCGTCGATGGACGCAATGG
CAACCGTGGCACGGGTGGCGGCAACAACTTCCCGACGAGCTTCGGCCCGGCGCAGAGCACGCTGGACACCACGGCGGAAA
CCGTGCCGAAGGCGAGTGAGGGCTCCGCCCGGGCCAAAAGCACCAAACCCGTCTATACCGTGCCGACGAACTCGACGCTC
ATGGGGTCGGTGGCGATGACGGCGCTGATTGGCCGCGTCCCGATCGACGGAACCGTGAACGATCCGTACCCCTTCAAAGT
CCTCGTCGGCCCCGACAATCTCACCGCCAACGGCATCGACATTCCTGACGTGGCCGGTGCGGTCTTCAGCGGCACGGCTT
CGGGGGACTGGACGCTGTCATGCGTGCGCGGCCAGGTGCGCAGCATCACCTTCGTCTTTCATGATGGAACGATCCGCACG
ATCCCCGAGGACCGCGAGGGCAATCAGCAGAACAACCAGCAGCAGAACGCTCAAAGTGGGGGCCTGGGCTGGATCAGTGA
TCCCTACGGCATCCCGTGCGTCGGCGGAGAGCGGCGCAGCAATGCGCAGCAGTACATCGGCTCGCAAGCCCTCATCACGG
CGGCCGGCGCCGGCGTGGCCTCGCTCATCCAAAGCGACAGCGGCCAGATGTCCTACGTGGGCTCGGACGGCTCTATTGGC
ACCGTGGGCATCAGCGGTCAGGAAGCGGTCGGCCGGATTCTCGCAGGCGGTGTCAAGGAGATGTCGAACTGGGTCAACAA
GCTGTACGGCCAGGCATTCGCCGCAGTGTATGTCCAGCCCGGCGCCAAAGTCGCCGTCCACCTCGACAAGCCGCTCGCCA
TCGACTTCGATCCCGAAGGTCGCAAGGTTGATCACCGCGCAGGAGAAAACCATGCTCTCGAACTTGACTAA

Protein sequence :
MRSNGLLKWLMIPVALLVLFFGIRLFSGGGSSAPSQAETGSQLTPEEMKALGIAGDTPRDTVATLVAQVKQLRTELQTAL
SDNKSQREENQRLRQRENSIDQRINSALETERSNLRRDQQQAASERQQTEGLLADLQQRLDSIGGRGGGHTDMPVGLGLR
DGDEAGMEGGMRWVDPDDKKPVDGRNGNRGTGGGNNFPTSFGPAQSTLDTTAETVPKASEGSARAKSTKPVYTVPTNSTL
MGSVAMTALIGRVPIDGTVNDPYPFKVLVGPDNLTANGIDIPDVAGAVFSGTASGDWTLSCVRGQVRSITFVFHDGTIRT
IPEDREGNQQNNQQQNAQSGGLGWISDPYGIPCVGGERRSNAQQYIGSQALITAAGAGVASLIQSDSGQMSYVGSDGSIG
TVGISGQEAVGRILAGGVKEMSNWVNKLYGQAFAAVYVQPGAKVAVHLDKPLAIDFDPEGRKVDHRAGENHALELD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C49 AAN62143.1 hypothetical protein Not tested PAGI-2(C) Protein 0.0 88
ORF SG59 AAN62281.1 hypothetical protein Not tested PAGI-3(SG) Protein 4e-139 70
pph82 CAI36123.1 hypothetical protein Not tested PPHGI-1 Protein 4e-104 49
EXA35 ABD94644.1 conserved hypothetical protein Not tested ExoU island A Protein 2e-102 47
unnamed ABR13364.1 hypothetical protein Not tested PAGI-5 Protein 2e-102 47
RL024 AAP84151.1 conserved hypothetical protein Not tested PAPI-1 Protein 6e-98 47
PMI2579 YP_002152298.1 hypothetical protein Not tested Not named Protein 9e-76 41
YpsIP31758_3707 YP_001402661.1 hypothetical protein Not tested YAPI Protein 1e-76 41
api37 CAF28511.1 putative exported protein Not tested YAPI Protein 1e-77 41
YE3484 YP_001007643.1 hypothetical protein Not tested YAPI Protein 1e-70 41