Gene Information

Name : XC_2032 (XC_2032)
Accession : YP_243113.1
Strain : Xanthomonas campestris 8004
Genome accession: NC_007086
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2448270 - 2448713 bp
Length : 444 bp
Strand : -
Note : -

DNA sequence : 
ATGCTCTCGAACTTGACTAAGGGCCTTGCGTCGGCCCTCCTCCTCGCGCTGCTGGGCGGCTGCGCCACCAGCAAGGAGGA
TCTGCTGACCCACGGCGACCGCTCGATGATGGATATCTGGCAGCAGGAAACCGGCGACGGCGCGGTGGGTGGTGCCGGCC
AGGTGGCTCACCGCCTGCTGCTCGACGCGCGCCAGAGCCTGCGTCGGCCGCTGACCGACGCCGACGTGCAGGCCGCACCC
GCCGAGCAGATGCGCTACACGCGCACGGCGCGCAACGAGGTCTATCGCCAGTTCCAGCGCCTGCCCAATCCCGACCTGGT
GATGTACGTATTCCCCCATTTGGCCGGCACGGACCCCGTGCCGGTTCCGGGCTACAGCACCGTGTTTCCGCTGTACCAAC
GCATCCAATACGCCATGCCGGGCGAGCGCGTGGAGGACTACTGA

Protein sequence : 
MLSNLTKGLASALLLALLGGCATSKEDLLTHGDRSMMDIWQQETGDGAVGGAGQVAHRLLLDARQSLRRPLTDADVQAAP
AEQMRYTRTARNEVYRQFQRLPNPDLVMYVFPHLAGTDPVPVPGYSTVFPLYQRIQYAMPGERVEDY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C48 AAN62142.1 hypothetical protein Not tested PAGI-2(C) Protein 5e-45 83
ORF SG58 AAN62280.1 hypothetical protein Not tested PAGI-3(SG) Protein 4e-40 73
pph83 CAI36124.1 signal recognition particle GTPase Not tested PPHGI-1 Protein 2e-35 63
unnamed ABR13363.1 hypothetical protein Not tested PAGI-5 Protein 2e-33 62
RL023 AAP84150.1 conserved hypothetical protein Not tested PAPI-1 Protein 3e-36 62
EXA34 ABD94643.1 conserved hypothetical protein Not tested ExoU island A Protein 1e-36 62
PMI2577 YP_002152296.1 lipoprotein Not tested Not named Protein 7e-27 50
t4267 NP_807866.1 lipoprotein Not tested SPI-7 Protein 2e-25 46
STY4571 NP_458656.1 putative lipoprotein Not tested SPI-7 Protein 2e-25 46
Pmu_03080 YP_005176207.1 conjugative transfer region lipoprotein Not tested ICEPmu1 Protein 8e-18 43