Gene Information

Name : XC_2020 (XC_2020)
Accession : YP_243101.1
Strain : Xanthomonas campestris 8004
Genome accession: NC_007086
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2435115 - 2437043 bp
Length : 1929 bp
Strand : -
Note : -

DNA sequence :
ATGCTCTCCCTGTTCCAGCGAAAAAGGGCTTCGGTCGCTGCCGCTGCGTCGCCAGGACCCACCACCGACCTCCCGAAAGG
GCTGACGCGGCCGGAGACGGCCGCGTCCTTGCTCGCCACCCCACGCCGTCAGAAGCTGCTGGAACACATTTGGCAGCGCA
CGTCGCTGTCTCGCCAGCAGTTCGACACGCTGTACCGCACGCCCTTGGAGCGCTACGCCGCGCTTGTGCAGCAATTTTCC
GCCTCAGAGAGCCACCACCATGCCTACCACGGCGGCATGCTCGACCATGGTCTTGAAATCGTTGCCTACGCGCTCAAGCT
GCGGCAGTCCTATCTGCTGCCCGCTGGCGCAACACCCGAAGACCAGGCCGCACAAGCCGAAGCCTGGACCGCCGCCACCG
CCTACGCCGCCCTGCTTCACGACATCGGCAAGATCGCTGTTGATCTGCATGTCGAGCAGGCCGACGGCAGTGTCTGGCAC
CCCTGGCATGGCCAGCTGAAGCAACCCTACCGATTCCGCTATCGAGAGGATCGCGAGTACCGCCTGCACAGTGCAGCTAC
CGGCCTGCTGTACCACCAGGTGATCGATCGCTTCATCCTTGACTGGCTCAGCGGCTTCCCATCGCTGTGGGCGGCGCTGC
TGTACATCATGGCAGGACAGTACGAGCATGCCGGGGTGCTCGGGGAACTGGTGATCAAGGCTGACCGTGCGTCCGTCGCC
CAAGAACTGGGAGGCGATCCGGCAAAGGCGATGGCCGCACCGAAGCATGCTCTGCAGCGCAAGCTGCTTGACGGCCTGCG
CTATCTGCTCAAGGAAGAGTTGAAACTAAATCAGCCCCAGGCGTCCGATGGCTGGCTGACGCACGATGCGCTCTGGCTCG
TCAGCAAGACCGTCTCGGACAAGTTGCGTGCCCACCTGTTATCGCAAGGCATAGACGGCATCCCAGCGAACAACTCAGCT
GTGTTCAACGTTCTTCAAGAGCACAGCATGCTCCAGCCCGCACCGGACGGCAAAGCGATCTGGCGCGCAACGGTGACCAG
CTCAAGCGGCTGGTCACATGCCTTTACGTTACTGCGGCTCTCGCCGGCCCTGATCTGGGAGGCTGGTGAGCGGCCGGCCG
CCTACGCGGGGACGGTGCTTGTTGAAGCAGCCCAAGGTGCCGAGACAACCGGCGAGAGTGCGCCGGACTTGCTTGACTCG
GCCATGCAGGACACCGCCGATGATCGAGCCAATCCGCCGTTGGAATCGAAGCCTTCGTTGAGCACACAACCCGTAGCGAA
AAACGCGCCGGACATGATGGATGAACTGCTGGCAATGATTGGGGCACCAGATCCGCCGAAGGCCGATGACCAAGGAAGTT
CATCGTCTCAGCCAATGCCTGAAGCTCCCGGAAAGCCACACCAGGTGAGCGAGTCCGTCCCAGCGAAAAAAAATCCAATG
TCGACCAGTACCCAACCATCCAGGGACGAGTCGAATGGCACCTCAACTCAAATGTCAGCTGATCATTTTGTGACATGGCT
GCAGCAGGCGATTGCATCGCGCCGACTCGTCATCAACGACGCTAAGGCGCTGGTGCATATCGTGGCGGATGCCGTCTATC
TGGTAAGCCCAGGTGTGTTTCAGCGCTATGCGCAAGAACATCCTCAAATCGCTGACTATGCCAAGCGTGAGGAGATGGCA
GATTGGCAGTGGGCGCAAAAGAGATTTGAGAAATTGCATCTACACCGTAAGCAAGCCAATGGCCTGAACATCTGGACGTG
CGAAGTAACCGGACCTCGCAAATCGCGCCGGCTTCACGGCTACCTGCTTGAGCGTTGGCAGGGTGTATTTGGCGAGCTTC
CGCCAAACAACCCTTACCTAAAACTTCGGGAAGTTGCCTCAGAAGCCACGATAGAAGCGGATGATCATCCGCGCGCAACG
CATAACTGA

Protein sequence :
MLSLFQRKRASVAAAASPGPTTDLPKGLTRPETAASLLATPRRQKLLEHIWQRTSLSRQQFDTLYRTPLERYAALVQQFS
ASESHHHAYHGGMLDHGLEIVAYALKLRQSYLLPAGATPEDQAAQAEAWTAATAYAALLHDIGKIAVDLHVEQADGSVWH
PWHGQLKQPYRFRYREDREYRLHSAATGLLYHQVIDRFILDWLSGFPSLWAALLYIMAGQYEHAGVLGELVIKADRASVA
QELGGDPAKAMAAPKHALQRKLLDGLRYLLKEELKLNQPQASDGWLTHDALWLVSKTVSDKLRAHLLSQGIDGIPANNSA
VFNVLQEHSMLQPAPDGKAIWRATVTSSSGWSHAFTLLRLSPALIWEAGERPAAYAGTVLVEAAQGAETTGESAPDLLDS
AMQDTADDRANPPLESKPSLSTQPVAKNAPDMMDELLAMIGAPDPPKADDQGSSSSQPMPEAPGKPHQVSESVPAKKNPM
STSTQPSRDESNGTSTQMSADHFVTWLQQAIASRRLVINDAKALVHIVADAVYLVSPGVFQRYAQEHPQIADYAKREEMA
DWQWAQKRFEKLHLHRKQANGLNIWTCEVTGPRKSRRLHGYLLERWQGVFGELPPNNPYLKLREVASEATIEADDHPRAT
HN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C36 AAN62129.1 conserved hypothetical protein Not tested PAGI-2(C) Protein 0.0 69
ORF SG44 AAN62266.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 0.0 67
pph99 CAI36140.1 predicted HD-superfamily hydrolase Not tested PPHGI-1 Protein 1e-124 50
RL003 AAP84130.1 pathogenesis-related protein Not tested PAPI-1 Protein 4e-142 50
unnamed ABR13343.1 hypothetical protein Not tested PAGI-5 Protein 9e-143 49
EXA2 ABD94612.1 conserved hypothetical protein Not tested ExoU island A Protein 1e-141 49