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Name : XC_2012 (XC_2012) Accession : YP_243093.1 Strain : Xanthomonas campestris 8004 Genome accession: NC_007086 Putative virulence/resistance : Unknown Product : IS1479 transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3039 EC number : - Position : 2424383 - 2425363 bp Length : 981 bp Strand : + Note : - DNA sequence : ATGCAACTGACGTTCGGTGACGCTGAGGGCCTGGGCAAGCGCAAGCAGACCCGGCGCGAGATCTTTCTGGCCGAGATGGA GCAGGTGGTTCCGTGGCAGCAACTGCTCGGGCTGATCGCGCCGCACTATCCCGTGTCGGGCCGGCCAGGTCGGCAGCCAT ACGCACTGGCGACGATGTTGCGGATTCATCTGCTGCAGCAGTGGTATGCGCTGAGCGATCCGGCGATGGAAGAAGCGCTG CACGAGATCCCGACCTTGCGGCGCTTTGCCCAGCTCGGTGGCTTGGACAACGTTCCGGACGAGACCACGATTCTCAACTT TCGGCGCCTGCTGGAGACCCATGGCCTTGCCGCGCGGATGCTGGAAGCGGTCAACGCGCATCTGGCACGCAAGGGGCAGA GCCTGCGGTCGGGCACGATCGTCGATGCGACGCTGATCGCTGCACCCAGTTCGACCAAGAATGCCGACCATGCGCGCGAC CCCGAGATGCATCAGACCAAGAAAGGTAATCAGTGGTATTTCGGGATGAAGGCGCACATCGGCGTGGATGAATTTTCCGG GCTGGTGCACCACGTCCATTGCACAGCCGCCAATGTCGCCGACGTCACGGTGACGCACACGTTGCTGCATGGCAAAGAAG ACAGCGTGTTCGGCGACAGCGGCTACACCGGTGCGGACAACCGCGAAGAACTGCAGGACTGCAAGGCTGCATTTTTCATT GCCGCCAGGCGTTCGACGCTGCAAGCCATCGGCAACAAACGCGAGCGTGCTCGGGAACAGCGTTGGGAACACTTCAAGGC CAGCGTGCGCGCGAAGGTGGAGCATCCGTTCCGGGTGATCAAGCGCCAGTTCGGTTACACCAAGGTCCGCTATCGCGGCC TGGCGAAGAACACCGCGCAGGTGCTGACGCTGTTTGCGCTGTCAAACCTGTGGATGAAGCGAAAGCAGTTATTGCCTGCT ATGGGGAGCGTGCGCCTGTAA Protein sequence : MQLTFGDAEGLGKRKQTRREIFLAEMEQVVPWQQLLGLIAPHYPVSGRPGRQPYALATMLRIHLLQQWYALSDPAMEEAL HEIPTLRRFAQLGGLDNVPDETTILNFRRLLETHGLAARMLEAVNAHLARKGQSLRSGTIVDATLIAAPSSTKNADHARD PEMHQTKKGNQWYFGMKAHIGVDEFSGLVHHVHCTAANVADVTVTHTLLHGKEDSVFGDSGYTGADNREELQDCKAAFFI AARRSTLQAIGNKRERAREQRWEHFKASVRAKVEHPFRVIKRQFGYTKVRYRGLAKNTAQVLTLFALSNLWMKRKQLLPA MGSVRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnp-33 | AAN62255.1 | transposase | Not tested | PAGI-3(SG) | Protein | 5e-93 | 65 |
| PSPTO_1407 | YP_003355052.1 | ISPssy transposase or derivative | Not tested | Hrp PAI | Protein | 4e-72 | 65 |
| tnpA | AAF71487.1 | TnpA | Not tested | Hrp PAI | Protein | 3e-72 | 65 |
| unnamed | AAO33449.1 | putative transposase | Not tested | Not named | Protein | 6e-54 | 54 |
| tnpA | ACF06175.1 | putative transposase | Not tested | Tn5036-like | Protein | 1e-60 | 47 |
| tnpA | ACF06178.1 | putative transposase | Not tested | Tn5036-like | Protein | 1e-60 | 47 |
