Gene Information

Name : XC_1964 (XC_1964)
Accession : YP_243047.1
Strain : Xanthomonas campestris 8004
Genome accession: NC_007086
Putative virulence/resistance : Unknown
Product : transcription-like protein
Function : -
COG functional category : K : Transcription
COG ID : COG2183
EC number : -
Position : 2366623 - 2368986 bp
Length : 2364 bp
Strand : +
Note : -

DNA sequence :
ATGCACGACACCCAGCTTGCCCAGCAGATCGCCCGCACCATCGCCGATGAGATCGGTGCCCAACCCGCCCAGGCGCGCGC
CGCCATTGCCCTTCTCGATGAAGGCGCCAGCGTTCCGTTCATCGCGCGCTACCGCAAGGAAGTCACCGGCGGTCTGGACG
ACACCCAGCTGCGCAACCTCGAAACGCGCCTGACCTACCTGCGCGAACTGGAAGACCGCCGCGCCGCGATCCTGTCCAGC
ATCGGCGAGCAGGGCAAACTCAGCGACGAACTGCGCAGCGAAATCGTCGCCGCCGACACCAAGTCGCGCCTGGAAGACCT
GTATCTGCCGTACAAGCCCAAGCGCCGCACGCGTGCGCAGATTGCGCGCGAGGCCGGGCTGGAACCGCTGGCGGACACCT
TGCTGGCCGACCCCACCCAGGCGCCGGACACCACCGCAGCGATCTACGTGGATGCCGACAAGGGCGTGGCCGACGTCAAG
GCCGCACTGGAAGGCGCCCGCGCGATCCTGATGGAGCGCTGGGGCGAAGACGCCGCGCTGGTCGGCGAACTGCGTAGCTG
GTTGAACGACAACGGCGTGATCCGTGCGCGTGTGGCCGAGGGCAAGGAAGAGGCCGGTGCCAAATACCGCGACTACTTCG
ACCACGCCGAATCGCTGGCCAGGATTCCCTCGCATCGCCTGCTGGCCTTGTTCCGGGCACGCCGCGAAGAATTTCTCTAC
CTGGATCTGGACCCGGGCACCGATGCCGACGCCGGTCACCAGTACGCCGAAGGCCGCGTGGCGCGCAGTGCCGGCATTTC
CAACGAAGGCCGCCCGGCCGACCGCTGGTTGCTCGATGCCTGCCGGCTCACCTGGCGCGCCAAGCTGCACATGCACCTGC
TGCTGGACCTGTTCAACCAGGCGCGCGAAAAGGCCGAGGCCGAGGCGATTGCGGTGTTCGGCGACAACCTCAAGGACCTG
ATGCTGGCGGCGCCCGCCGGCCCGCGCGTGGTGCTGGGCCTGGACCCGGGCATCCGCACGGGCTGCAAGATCGCCGTGGT
CGACGCCACCGGCAAGCTGGTAGCCACCGAGACGATCTACCCGCACGAACCCAAGCGGCAGTGGGACCAGTCGCTGCAGA
CGCTCAAGAAGCTGTGCCTGCAGCACAACGTGGAGCTGATCGCGATCGGTAACGGTACTGCCAGCCGCGAGACCGACAAG
CTTGCCGGCGAGGCAATTGCCTTGTGCGACCGCGCCAAGCTGCAGAAGATCGTGGTCAGCGAAGCCGGCGCATCGGTGTA
CTCCGCATCTGAATTCGCCGCCAAGGAATTCCCGAACCTGGATGTCTCGCTGCGCGGTGCGGTGTCGATCGCGCGGCGCC
TGCAGGACCCGCTGGCCGAGTTGGTCAAGATCGAGCCCAAGGCAATCGGTGTGGGCCAGTACCAGCACGACGTGGACCAA
TATCGCCTGGCCAAGGCGCTGGACGCGCGCGTGGAAGACTGCGTCAACGCCGTGGGCGTGTACGTCAATACCGCCTCGGC
GGCCTTGCTGTCACGCGTATCGGGCCTGTCCAGTACGGTGGCGGAAAACATCGTGCGGCATCGCGACGACAACGGCCCGT
TCAAGCGCCGCAAGGACCTGCTCAAGGTCCCGCGCCTGGGCGACAAGACCTTCGAACAATGCGCCGGCTTCCTGCGCATT
GCCGACGGCGATGAGCCGCTGGATGTGTCGGCGGTGCACCCGGAGGCCTACCCGGTGGTGGAGCGCATCGTCAGCAGCAC
CGGCAAGCCAATCAAGGCCTTGCTGGGCGATGGCAGCTTCCTGCGCGCGCTCAAGCCGGAGCAGTTCACCGACGAGCAAT
TCGGTGTGCCCACCGTGCGCGACATCCTCAAGGAAATGGAAAAGCCCGGCCGGGACCCGCGCCCGGAATTCAAGGCGGCG
CAGTTCGCCGAGGGCATCGAGGACATCAAGCACCTCAAGCCCGGCATGATCCTGGAAGGTGTGGTCAGCAACGTCGCGGC
CTTTGGCGCGTTCGTCGACATCGGCGTGCACCAGGATGGCCTGGTCCACATCTCGGCGCTGTCGGACACCTTCGTCAAGG
ACCCGCGCGACGTGGTCAAGGCCGGCGACATCGTCAAGGTCAAGGTGCTGGAAGTGGACGTGGCGCGCAAACGCATCGCG
CTGACCCGGCGGTTGTCGGATACGCCGCCACCGGCCGACGCGGCCGCGCAGTCACGCGACACACGTGGCGCGGGGCAGGG
GCGGCGCGACGGAAGCGGTGGTGGCGGGCGCGGCCCGGCAGCCGGCACTGCCAAGCCGCGGACCAGCGCGCCGCCCGCCA
ACAACGCATTGGCCGACGCCTTCGCGCGCGCCAAACGCAGCTGA

Protein sequence :
MHDTQLAQQIARTIADEIGAQPAQARAAIALLDEGASVPFIARYRKEVTGGLDDTQLRNLETRLTYLRELEDRRAAILSS
IGEQGKLSDELRSEIVAADTKSRLEDLYLPYKPKRRTRAQIAREAGLEPLADTLLADPTQAPDTTAAIYVDADKGVADVK
AALEGARAILMERWGEDAALVGELRSWLNDNGVIRARVAEGKEEAGAKYRDYFDHAESLARIPSHRLLALFRARREEFLY
LDLDPGTDADAGHQYAEGRVARSAGISNEGRPADRWLLDACRLTWRAKLHMHLLLDLFNQAREKAEAEAIAVFGDNLKDL
MLAAPAGPRVVLGLDPGIRTGCKIAVVDATGKLVATETIYPHEPKRQWDQSLQTLKKLCLQHNVELIAIGNGTASRETDK
LAGEAIALCDRAKLQKIVVSEAGASVYSASEFAAKEFPNLDVSLRGAVSIARRLQDPLAELVKIEPKAIGVGQYQHDVDQ
YRLAKALDARVEDCVNAVGVYVNTASAALLSRVSGLSSTVAENIVRHRDDNGPFKRRKDLLKVPRLGDKTFEQCAGFLRI
ADGDEPLDVSAVHPEAYPVVERIVSSTGKPIKALLGDGSFLRALKPEQFTDEQFGVPTVRDILKEMEKPGRDPRPEFKAA
QFAEGIEDIKHLKPGMILEGVVSNVAAFGAFVDIGVHQDGLVHISALSDTFVKDPRDVVKAGDIVKVKVLEVDVARKRIA
LTRRLSDTPPPADAAAQSRDTRGAGQGRRDGSGGGGRGPAAGTAKPRTSAPPANNALADAFARAKRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 0.0 62