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Name : XC_1929 (XC_1929) Accession : YP_243012.1 Strain : Xanthomonas campestris 8004 Genome accession: NC_007086 Putative virulence/resistance : Virulence Product : epimerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 2327786 - 2329624 bp Length : 1839 bp Strand : + Note : - DNA sequence : ATGGTCTGGGTGTGCTGGCAGCTGCTGCATGCGGGCCGTTACTCCATGCTGCGCGACGCGCCAGACCTGCCACTGTGGGA TTGGCGTACGGCGGTGGTCTTGGTCGCACAGGGGCTGGTGTTCTGGCGGATGGGGTTGTATCGCGGCCTCTGGCGCTTTG CCTCGGTGCCGGATCTGTGGAACATCTTCAAGTCCAGTTTTCTCGGCCTGGTCGCGATCGTGCTGGCGCTGTCGTACGAC CGTCTCGATGGCGTGCCGCTCTCGGTGTTGGTGGTCTATCCGTTTGCGTTGTCGGCGTTGCTCGGCACGCCGCGGTTGCT CTACCGCGCCTGGAAGGATTACCAAATTGCCCACTCTGGCGATGCCGCGCAGCGGGTGCTGATTCTTGGCGCAGGGCGTG CGGCCGAGGGCCTGGTGCGTGACCTGCGCCGTAGCGGCACGTTCGTCCCGGTCGGCTTTCTGGATGACGCCACCCATCTG CACGGCGCCAAGATCCAGGGCCTGAATGTGCTGGGCAACCTGGATCAGGCCGCGGCGATCGCCAAGGAAACTGCGGCCAA GCTCCTCGTCATCGCGATTCCATCGCTGGATGCATCCGGCATGCAGCGGGTGGTGGCCATCTGCGAAAGCACCGGCCTGC CGTTCCGGATGGTGCCCAAGCTGATCAACGTGCTGGAAGGCCGGTCGCTGCCAGGCGAGTTGAAGGAAGTGGCGATCGAG GACCTGCTCAACCGCAAGCCGGTCACGCCGGACTGGCGCCTGATCCGCGACTGGCTCACCAACAAGACCGTGATGGTGAC CGGCGCCGGTGGTTCGATCGGCTCGGAAGTCTGCCGGCAGTGCGCGCGTCATGGCGCGCGCCGCATCGTGCTGCTGGAAA TCGATGAGCTGGCGCTGCTGACCATCGATTCGGACCTGCGCCGGTTGTTCCCCGATATCGAAGTGGTGCGTGTGCTTGGC GACTGCGGCGACCCGGCAGTGGTGGCGCATGCCTTACGCACGGCCACGCCCGATGCCGTGTTCCATGCGGCGGCCTACAA GCAGGTACCGCTGCTGGAAGAGCAGCTGCGCGAAGCGGTGCGCAACAACGTGCTGGCAACCGAGAACGTGGCGCGTGCCT GCCAGCGGGCGCGGATCGAAACGTTTGTGTTCATCTCCACCGACAAGGCGGTCGAGCCGGTCAACGTGCTCGGCGCGAGC AAGCGCTATGCGGAGATGATCTGCCAGAGTCTTGACGCCCGCGATGCGCCGACGCGCTTCATCACCGTGCGCTTCGGCAA CGTGCTGGATTCGGCCGGCAGCGTGGTGCCGTTGTTCCGCGAACAGATCCGGCAGGGCGGCCCGGTCACGGTGACGCATC CGGATGTGACGCGTTACTTCATGACCATTCCCGAAGCCTGCCAGCTGGTGGTGCAGGCCGCAGCATCTGCGTCGCACGGC GCCATCTATACGCTGGACATGGGCGAGCCGGTGCCGATCCGGCTCCTGGCCGAGCAGATGATCCGCCTGGCAGGCAAGCA GCCGGGCAAGGACATCGCCATTCTCTACACCGGTCTGCGCCCGGGCGAAAAATTGCACGAGACCTTGTTCTATTCCGACG AGGACTACCGACCCACCGCGCATCCCAAGATCCTGGAAGCCGGTGTGCGCGAGTTCTCGCACGAGCAGGTGTTGCAACTG GTGACGCGCCTGCGCGAGGCGGTTAACCGCTATGACATCAACGCAATGGAGACTGTGCTGGGCAGTCTGATGCCGGATTT TGCGGCTGCTCGACGGAAAGTCGACACGCGATCTGATACGGTCGTTCCATTCCCCGCACGTGAGGTCAGAAGACTTTAA Protein sequence : MVWVCWQLLHAGRYSMLRDAPDLPLWDWRTAVVLVAQGLVFWRMGLYRGLWRFASVPDLWNIFKSSFLGLVAIVLALSYD RLDGVPLSVLVVYPFALSALLGTPRLLYRAWKDYQIAHSGDAAQRVLILGAGRAAEGLVRDLRRSGTFVPVGFLDDATHL HGAKIQGLNVLGNLDQAAAIAKETAAKLLVIAIPSLDASGMQRVVAICESTGLPFRMVPKLINVLEGRSLPGELKEVAIE DLLNRKPVTPDWRLIRDWLTNKTVMVTGAGGSIGSEVCRQCARHGARRIVLLEIDELALLTIDSDLRRLFPDIEVVRVLG DCGDPAVVAHALRTATPDAVFHAAAYKQVPLLEEQLREAVRNNVLATENVARACQRARIETFVFISTDKAVEPVNVLGAS KRYAEMICQSLDARDAPTRFITVRFGNVLDSAGSVVPLFREQIRQGGPVTVTHPDVTRYFMTIPEACQLVVQAAASASHG AIYTLDMGEPVPIRLLAEQMIRLAGKQPGKDIAILYTGLRPGEKLHETLFYSDEDYRPTAHPKILEAGVREFSHEQVLQL VTRLREAVNRYDINAMETVLGSLMPDFAAARRKVDTRSDTVVPFPAREVRRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 3e-79 | 43 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 4e-73 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| XC_1929 | YP_243012.1 | epimerase | VFG1300 | Protein | 2e-76 | 44 |
