Gene Information

Name : XC_1296 (XC_1296)
Accession : YP_242385.1
Strain : Xanthomonas campestris 8004
Genome accession: NC_007086
Putative virulence/resistance : Virulence
Product : proline imino-peptidase
Function : -
COG functional category : R : General function prediction only
COG ID : COG0596
EC number : -
Position : 1584512 - 1585453 bp
Length : 942 bp
Strand : +
Note : -

DNA sequence : 
ATGCAGTGCACCGAGGGTTTCGTCGAATTTCGCGGCTATCGCACCTGGTACCGCATCACCGGCGACCTGCACAGCGATGC
GTGCCCGCTGATCGTGCTGCATGGCGGCCCGGGCTGCACGCACGACTACGTCGACAGCTTTACCGATCTGGCCGGCAGCG
GCCGCGCGGTCATTCACTACGACCAATTGGGCAACGGCCATTCCACCCATCTGCCCAATGCCGACCCCAGCTTCTGGACG
GTGGGCCTGTTCCTGGATGAGCTGCAGGCGCTGATCAGCCATCTCGGACTGGCACAGTACGCGCTGCTGGGCCAGTCGTG
GGGCGGCATGCTGGCCGCCGAACACGCGGTGCGCCGCCCTGCCGGACTGCGCGCACTGGTCATCGCCAACTCGCCCGCGT
CGATGGGCTTGTGGCGGGCCGCCGCGCTGCGCCTGCGCGCGCGCCTGCCCGAGCCCGTACAGGCCGCCCTGGACGAACAT
GAAGCCGCCGGCACCCTGGATTCGCCCGCCTACCGCGCCGCCACGCAGGCGTTCTACGCACAGCACGTGTGCCGCGTGCT
GCCGTGGCCTGCGGAGGTGGCGCTCACCTTTGCCGCGATCGATGCCGATCCCACCGTCTACCACGCGATGAACGGCCCCA
CCGAATTCCACGTGGTGGGCAGCCTGCGCAACTGGAGCATCATCGAACGCCTGCACCGCATCACCGCGCCGACGCTGGTG
CTGTCCGGCAAATACGATGAAGCCACGCCGGAAACCGTGGAGCCTTACGCACGGTTGATTCCCGATGCGCGCTGGCATGT
CTTCCCCAACTCCAGCCACATGCCGCATGTGGAAGAGCGCGAGGCCTGCATGCGCCTGGTCGGCAACTTCCTCGACGACC
ACAGCCCGTGGCCAGGCGGGCAACTGACGCGTCCCTCGGCGCTGGCCAATCGTGCCGTCTGA

Protein sequence : 
MQCTEGFVEFRGYRTWYRITGDLHSDACPLIVLHGGPGCTHDYVDSFTDLAGSGRAVIHYDQLGNGHSTHLPNADPSFWT
VGLFLDELQALISHLGLAQYALLGQSWGGMLAAEHAVRRPAGLRALVIANSPASMGLWRAAALRLRARLPEPVQAALDEH
EAAGTLDSPAYRAATQAFYAQHVCRVLPWPAEVALTFAAIDADPTVYHAMNGPTEFHVVGSLRNWSIIERLHRITAPTLV
LSGKYDEATPETVEPYARLIPDARWHVFPNSSHMPHVEEREACMRLVGNFLDDHSPWPGGQLTRPSALANRAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pip YP_216388.1 hydrolase or acyltransferase Not tested SPI-2 Protein 3e-40 44
orf32 NP_460345.1 proline iminopeptidase Not tested SPI-2 Protein 9e-41 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XC_1296 YP_242385.1 proline imino-peptidase VFG0481 Protein 4e-41 44