Gene Information

Name : XC_1245 (XC_1245)
Accession : YP_242334.1
Strain : Xanthomonas campestris 8004
Genome accession: NC_007086
Putative virulence/resistance : Virulence
Product : glucosyl transferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0463
EC number : -
Position : 1524121 - 1525164 bp
Length : 1044 bp
Strand : +
Note : -

DNA sequence :
ATGCTGCCGGCCGATCAGAACGCTCCGCTCACTGCGGAACGCCTGACCGTGGTGATTGCCGCCTTCAACGAGGCGACCAG
CATCCCGTTGCTGCACCCGCGCCTGCAGGGTGTCCTGGCTGGCCTGAGCGGCGTGCAGACGCACGTGCTGTATGTCGACG
ATGGCAGCACCGACGACACCTGGCAGGTGCTGCAGGCGCTCACCGATGCCGATGCGCAGGTCAGTGCAGTGCGGTTGTCG
CGTAATTTCGGCAAGGAAGTGGCGATCTCGGCCGGTCTGGACCATGTGCTGCCGGGCGCGGTGGTGCTGCTGGACGCCGA
TGGCCAGGATCCGCCGGAGCTCATTCCCGAGTTCGTCGCGTTGTGGCGCGCCGGGTACGACAACATCTTTGGCACGCGGG
TGTTTCGCGAAGGCGAGAGCTGGTTGAAGCGTGCGGCCGCGCATGCGTTCTACCGGGTGATCCGGCAATTGTCGCGAACG
CCGATTCCTGCCGACACCGGTGATTTCCGGCTGCTCTCGCCTCGGGTGGTGCAGGCGCTGCAGCAATTGCGCGAACGCCA
TCGTTTCATGAAAGGCCTGTTTGGCTGGGTGGGATTTCGCCAGGTGGCGCTCCCGTACCGGCGCGCACCGCGCCTGTCGG
GGCGCAGCAAGTTCACGGTGTGGCGGCTGTGGAATTTCGCGCTGGACGGCATCACCAGCTTCTCCACCGTGCCGCTGCGC
GCGGCCACCTACCTGGGCATGCTGACGGCACTGGTGGCGTTCGGGTTCGGTGGATGGGTGATCGTCAAGGCGGCGCTGAT
GGGCGACCCGGTGCCCGGCTGGCCGACCATGATGTCGATCATCCTGTTCCTGGGCGGCATCCAGCTGATTGCGCTGGGCA
TGATCGGCGAGTACCTGGGGCGCCTGTACGACGAGGCCAAGCAACGGCCGCTGTATCTGATCGACACGTATCGCGGCGCG
GCGGGAGTATTCTCGGGCGACCAGTCCAATCGCGGAGCAGGCCATGCAAACGGTACGGCAGCTGTTGGGGATGAAGCAGG
TTGA

Protein sequence :
MLPADQNAPLTAERLTVVIAAFNEATSIPLLHPRLQGVLAGLSGVQTHVLYVDDGSTDDTWQVLQALTDADAQVSAVRLS
RNFGKEVAISAGLDHVLPGAVVLLDADGQDPPELIPEFVALWRAGYDNIFGTRVFREGESWLKRAAAHAFYRVIRQLSRT
PIPADTGDFRLLSPRVVQALQQLRERHRFMKGLFGWVGFRQVALPYRRAPRLSGRSKFTVWRLWNFALDGITSFSTVPLR
AATYLGMLTALVAFGFGGWVIVKAALMGDPVPGWPTMMSIILFLGGIQLIALGMIGEYLGRLYDEAKQRPLYLIDTYRGA
AGVFSGDQSNRGAGHANGTAAVGDEAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_03027 YP_001439092.1 hypothetical protein Not tested Not named Protein 3e-63 44
gtrBI AAF09026.1 GtrBI Not tested SHI-O Protein 2e-61 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XC_1245 YP_242334.1 glucosyl transferase VFG0670 Protein 2e-62 43