|
Name : XC_1041 (XC_1041) Accession : YP_242132.1 Strain : Xanthomonas campestris 8004 Genome accession: NC_007086 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 1256298 - 1257542 bp Length : 1245 bp Strand : - Note : - DNA sequence : ATGTATTCAATCGGTGGCGGCAACGCCGTCTCCATGAGCGGCGCTGCTGGTATGCGCTCGATAGGCGTGGGCGCCGGCTG GAACAGCAATTTGGTCTGTGGGGATATGAATATCAGCACGACGATTCAGAACCAGCTCAATGGGCTGACGAATGGATTTC AGAACATCATGGGTAACGTGATTCAGAGCGCGACGAGTGCCGTCGCGTCGCTGCCCGCCTTGATCATCCAGCGCGCAGAC CATGGTCTGTACAACCTGTTGACCAATGGCGTGCTACAGGCCCGCCTGGACTTTGACCGTTCCAAACTCACCTGTCGCGC CATGGCCGAACGGATGGCCCAGACGGCTGGTGGCCAACTCGGTTGGAACCAGATAGCAGAGGGCATGGCTCTTCGCCAGG CTGTGACCAGTACCGATGCAGTGTCCGCTATCGAGAAGGCTGAAACAACGCGTGGCAATGACGGTGTTCCTTGGGTTGGC GGCAATAACGCTGGTGGTGCGGGTCAGTCCTCGATCAAGGTGGTCGCCGATGTGACCCGCGCGGGCTACAACCTGGTCAA TGGCCGCAGCGTTACCGATACCTCGTCGATAGATGCAACTAGCTGCAACAGCTTGGCTTGCCAGACATGGCCTACCCCGC AAGCAGCAACTGAATGGGCAACCCGTGTCTTGGGGGAGCAGGAGCAGCGTACTTGCGAAGACTGTACCAAGACTCAAACC ATGCCGGGTGTGGGTTTGACGCCACTTATCCAGGAAGAATACGAAGCCAAATTGCAGTCCCTGCAGGAGCTGATCGACGG AACCCGCAATACCACGTTCGAAAATTTGCGCGCGGCCGGCAGCACGTCTTTGCCGATCACCCGGGGTGTTATTGAAGCGC TGCGAGATGAACCGGACCAAGACATCCTCGCGCGCCGACTGGCCTCAGAGGTGGCGCTGTCTTCTGTTTTAGAGAAGGCA TTGCTGTTGCAACGCACGCTTCTGACTGGGCAGAAAGAGCCCAATGTTTCAGCCAATCAGCTTGCGGTTGAGGCTATCAA CCACGAGAGCAATACGCTGGATCGTGAGATCCAGAATTTGAAGACCGAACTTGAACTACGCCGTGAGCTCGCTAACAACT CGCCGATGGCGATCATCCAGCGCCACGGTACAAGGGCATCGGGTTCGCGTGGGGTCTACGAAGGTGATCCTGTCCCTGAC CGCCTCGACCAATTGCAGCGGCCATCGCCAGGGCGGGTGCAATGA Protein sequence : MYSIGGGNAVSMSGAAGMRSIGVGAGWNSNLVCGDMNISTTIQNQLNGLTNGFQNIMGNVIQSATSAVASLPALIIQRAD HGLYNLLTNGVLQARLDFDRSKLTCRAMAERMAQTAGGQLGWNQIAEGMALRQAVTSTDAVSAIEKAETTRGNDGVPWVG GNNAGGAGQSSIKVVADVTRAGYNLVNGRSVTDTSSIDATSCNSLACQTWPTPQAATEWATRVLGEQEQRTCEDCTKTQT MPGVGLTPLIQEEYEAKLQSLQELIDGTRNTTFENLRAAGSTSLPITRGVIEALRDEPDQDILARRLASEVALSSVLEKA LLLQRTLLTGQKEPNVSANQLAVEAINHESNTLDREIQNLKTELELRRELANNSPMAIIQRHGTRASGSRGVYEGDPVPD RLDQLQRPSPGRVQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF C42 | AAN62135.1 | hypothetical protein | Not tested | PAGI-2(C) | Protein | 1e-158 | 86 |
| ORF SG50 | AAN62272.1 | hypothetical protein | Not tested | PAGI-3(SG) | Protein | 3e-150 | 78 |
| pph90 | CAI36131.1 | hypothetical protein | Not tested | PPHGI-1 | Protein | 5e-134 | 65 |
| RL016 | AAP84143.1 | putative pathogenesis-related protein | Not tested | PAPI-1 | Protein | 2e-124 | 65 |
| EXA19 | ABD94628.1 | conserved hypothetical protein | Not tested | ExoU island A | Protein | 5e-125 | 65 |
| unnamed | ABR13356.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 5e-123 | 65 |
| STY4577 | NP_458662.1 | hypothetical protein | Not tested | SPI-7 | Protein | 3e-77 | 42 |
| t4274 | NP_807872.1 | hypothetical protein | Not tested | SPI-7 | Protein | 3e-77 | 42 |
| unnamed | AAX39459.1 | unknown | Not tested | Hrp PAI | Protein | 5e-76 | 42 |
| YpsIP31758_3700 | YP_001402654.1 | hypothetical protein | Not tested | YAPI | Protein | 7e-73 | 41 |
