Gene Information

Name : XC_1032 (XC_1032)
Accession : YP_242124.1
Strain : Xanthomonas campestris 8004
Genome accession: NC_007086
Putative virulence/resistance : Unknown
Product : ISxcc1 transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1247680 - 1248447 bp
Length : 768 bp
Strand : -
Note : -

DNA sequence :
GTGGTTGGCGTGGCTCGCTCGACAGCACGTTATCGGCGCCGTCCCGATCGGGATGAGGAGGTTATTGCGCTGTTGTCCGA
GTTGGCCGAGCGTTTTCCCGAGCGCGGATTTGGAAAGCTTTTTCAGATCATCCGTCGTCGCGGACATCTGTGGAATCACA
AGAGGGTCTGGCGCGTGTACTGCCTGATGAAACTCAATCAACGTCGCCGCAGCAAGCGCCGGGTACCGACGCGTCATCCA
CAGCCGCTGGCATGCGGTGATCGACCCAACGCTGGATGGTCGATCGATTTCATGTCTGATGCGCTATGGGATGGTCGACG
GTTCCGCACGTTCAATATCATCGACGATTTCAGTCGGGAAGCCTTGGCCATCGATGTGGACCTGAATCTTCCGGCTGCCC
GCGTCATCCGCACGTTGGAACGTATCGCAGCTTGGCGCGGCTATCCGAACAAGCTGCGTTTGGACAATGGCCCGGAATTT
GTTGCATTGGCCTTGGCCGAGTGGGCTGAGCGCAAGGGTATCGCGTTGGATTTCATCGAGCCGGGGCGTCCGATGCAGAA
CGGTTTTATCGAACGCTTCAACGGCAGCTACCGGCGTGGCGTATTGGATATGCACATATTCCGCACGCTGAGCGAGGTCC
GCGAACAGACCGAACAGTGGCTGGCCGACTACAACCAACAAATACCGCACGACAGCCTGGGCGGGCTAACGCCCGCCGAG
TTCCGTGAGCAACATCAACCGCAGACCTCTAGCTTTATCTGGCATTGA

Protein sequence :
MVGVARSTARYRRRPDRDEEVIALLSELAERFPERGFGKLFQIIRRRGHLWNHKRVWRVYCLMKLNQRRRSKRRVPTRHP
QPLACGDRPNAGWSIDFMSDALWDGRRFRTFNIIDDFSREALAIDVDLNLPAARVIRTLERIAAWRGYPNKLRLDNGPEF
VALALAEWAERKGIALDFIEPGRPMQNGFIERFNGSYRRGVLDMHIFRTLSEVREQTEQWLADYNQQIPHDSLGGLTPAE
FREQHQPQTSSFIWH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trp1400B CAB46580.1 IS1400 transposase B Not tested HPI Protein 8e-72 58
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 1e-36 44
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 1e-41 42