Gene Information

Name : XC_1025 (XC_1025)
Accession : YP_242118.2
Strain : Xanthomonas campestris 8004
Genome accession: NC_007086
Putative virulence/resistance : Unknown
Product : IS1404 transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1242187 - 1243212 bp
Length : 1026 bp
Strand : -
Note : -

DNA sequence :
GTGCCGGCGGCATGGCTTCAGCGAGGCCTCGTACTACCTGTGGCGCAGCAAGTTCGGTGGGATGAGCGTGCCCGATGCCA
AGCGGCTCAAGGACCTCGAGTCCGAGAACGCGCGGCTGAAGAAGTTGCTGGCCGAGCAGTTGTTCGAGAACGACCTGATC
AAGGATGCACTGCGAAAAAAGTGGTAAGCGCACCGGCGCGTCGTACGCTGGTGCGCGAATGGATCGGGCGTGGTGCCAGC
GAGCGTCGTGCGTTGGCAGTGATCGGCATGAGCGCCAGTGCACTGCGGTATTGCCCGCGCGAAGATCGCAATGGCGAACT
GCGCGAACGCATCTGTGCGTTGGCACATCGCCATCGCCGCTATGGCGTGGGAATGATCTATCTCAAATTGCGGCAAGAAG
GGCGCATCGTGAACTACAAGCGTGTGGAACGGTTGTATCGCGAGCAGCAGCTGCAAGTGCGCCGCCGCAAGCGCAAGAAG
GTCCCAATAGGCGAGCGTCAACCGCTGCTGCGGCCATCGCAGGCCAACCAGGTGTGGTCGATGGACTTTGTGTTCGACCG
CACCGCGGAAGGCCGGGTGATCAAGTGTCTGGTGATCGTGGACGATGCAACCCACGAAGCGGTCGCCATCGAAGTGGAGC
GCGCGATCTCCGGGCACGGGGTGACGCGCGTGCTGGACCGACTGGCGCACAGTCGCGGTTTGCCGAAGGTGATCCGCACT
GACAACGGCAAGGAGTTTTGCGGTAAGGCGATGGTCGCTTGGGCGCATGCCCGTAATGTGCAACTACGGCTCATCCAGCC
AGGCAAACCGAACCAGAACGCCTATGTTGAATCCTTCAACGGCCGACTGCGCGACGAATGCCTCAACGAGCACTGGTTCC
CGACGTTACTGCACGCGCGCACCGAAATCGAACGCTGGCGACGCGAATACAACGAGGACCGACCCAAGAAAGCAATCGGC
GGCATGACGCCGGCTGCGTATGCCCAACATCTGGCAAACACCGATATCATCAACCCCGGACTCTAA

Protein sequence :
MPAAWLQRGLVLPVAQQVRWDERARCQAAQGPRVRERAAEEVAGRAVVRERPDQGCTAKKVVSAPARRTLVREWIGRGAS
ERRALAVIGMSASALRYCPREDRNGELRERICALAHRHRRYGVGMIYLKLRQEGRIVNYKRVERLYREQQLQVRRRKRKK
VPIGERQPLLRPSQANQVWSMDFVFDRTAEGRVIKCLVIVDDATHEAVAIEVERAISGHGVTRVLDRLAHSRGLPKVIRT
DNGKEFCGKAMVAWAHARNVQLRLIQPGKPNQNAYVESFNGRLRDECLNEHWFPTLLHARTEIERWRREYNEDRPKKAIG
GMTPAAYAQHLANTDIINPGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 9e-59 56
XCV0439 YP_362170.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 5e-38 42