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Name : XC_1018 (XC_1018) Accession : YP_242112.1 Strain : Xanthomonas campestris 8004 Genome accession: NC_007086 Putative virulence/resistance : Unknown Product : phage-related integrase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0582 EC number : - Position : 1231170 - 1233059 bp Length : 1890 bp Strand : + Note : - DNA sequence : TTGGTACGCATGCTCACAGATATGGTCGTCCGGCAAGCAAAGGCTTCCGACAAGCCCTACACCCTCGCAGACTTCGACGG TTTGTTCCTCTACGTCTCCCCTGTTGGCGGCAAAGCCTGGCACTTCCGCTACACCTGGGTTGGACAACGTGCCCGAATTT CGCTTGGCAGCTATCCCGAACTCTCTCTGCGCGACGCGCGCGAATTTCGTGACCAGGCCCGTGCCCTCGTCGCCAAGGGC ATCAACCCGCGCACCGACCGAAAGCAAAAACGCCAAGCCATCCGGTTGGCTGGCGAAAACACCTTCATGGCGGTCTACGA AAAGTGGATGGAACACCGGCAACTGACCCTGGAAGAAGGTCGTCAAAGTTCGCTGGAACAGATCCGCCGCGTGTTCAAAA AAGATGTATTCCCTTACCTCAAACGCTACACCATCTACGAGATCACCCGTCCGGTGCTACTGGAGGTGATCGGCCGGATC GAGAAACGCGAGTCACTGTCCGTCGCCGAAAAGGTGCGCACCTGGCTCAAGCAACTCGCCGACTACGCCATGGTGGTCAT TCCGGGCATGGTCGAGCACCCCGCCATCGATCTACACGTGGTCGCTGTTCCGTTGCCGCCCGTTGAGCACAACCCATTCC TGCGTATGCCCGAGCTCCCCCTGTTTCTGCAGACACTTCGCAAGTACCGCGGCATGCAGATGACCCAATTGGCCATTCGC CTGTTGCTGCTGACGGGTGTACGCACAGGCGAACTACGTTTGGCCACGCCGGACCAATTCGATCTGGAACAAGGTTTATG GATCATCCCGGTGATGTCGCTCAAGCAGCGCAAGATGCTGACCAAGAAGAAGCGAAAACGCGTAACTGACATCCCGCCCT ACATCGTGCCGCTGCCCGTGCAAGCCATCGAGATCGTGCGGCACATGCTCGACCTGTTCAAACCAGCGCAGACCTACCTT TTCCCAGGCGTGAAGCGAATCACTGCCCGCATGAGCGAAAACACGGTCAACCGTGCGATCAAGCGGCTGGGCTATGACGG TCGTCTCACCGGTCACGGCATCAGGGCGACGATTTCAACCGCCCTCAATGAGCTGGGTTACCCCAAGGTCTGGGTCGACG CGCAACTCTCACATGCTGACCCCAATCGCATCAGCGCCACCTACAACCATGCCGAGTACGTTGAACAGCGTCGGCTAATG ATGCAGGACTGGGCTGATCGGCTGGATCTGTTCGAGCAAAATCAGGTTCAGATTGCCAGCACGCACCTCACCATCCACCT TCAGGGCGTTCCCACAATTGCCGGTCAGAAAGTCACGCCGCTGCCGGCGTTGGGCCAACACGCTCCCATCATGCTGGTAG CACCCAATGAGCAAACGATGCCAGCTGTCGGCACCGGGACTCAGCGGCTCTCTGCAGTGCAAATGCCTGAATACGCTCTA CCGAAGATCTCTGAGGTCCAGCGAGAGCGATTGGAGGTACTGGACATTTTTGAAGGGCCCGACAACCTGGTCGTCGCGGA CTATGCCAAGCTCGCGGGCAAATCGCGGCGGTGGATTACTTACGAGATCCAGGCCCGCAACCTACTTTCAATTCAGTTGG GCAACAAGGGGCAGCGGGTTCCGGTGTGGCAACTCAACATGTTCAAGCGCCGCTTGGTGCAGGCGGTACTCAAGCGTCTG CACCGTGGCGTTGATACATGGGATATCTACTACGCCTTGACGCGACCTCGCGAGGAACTTGATGGCAAGTCGCCTATTGA GGCGCTCACTTCGGACAATCAGCAAGCGATGGTTGAGGCGGTTTGCCGGGCCGTATCTGAAGCAACGACGCCAGTCGTTG AGAAGCGAGTCCCCATAAACAGGATTGCCGAATGCATGTCTGAATTTTGA Protein sequence : MVRMLTDMVVRQAKASDKPYTLADFDGLFLYVSPVGGKAWHFRYTWVGQRARISLGSYPELSLRDAREFRDQARALVAKG INPRTDRKQKRQAIRLAGENTFMAVYEKWMEHRQLTLEEGRQSSLEQIRRVFKKDVFPYLKRYTIYEITRPVLLEVIGRI EKRESLSVAEKVRTWLKQLADYAMVVIPGMVEHPAIDLHVVAVPLPPVEHNPFLRMPELPLFLQTLRKYRGMQMTQLAIR LLLLTGVRTGELRLATPDQFDLEQGLWIIPVMSLKQRKMLTKKKRKRVTDIPPYIVPLPVQAIEIVRHMLDLFKPAQTYL FPGVKRITARMSENTVNRAIKRLGYDGRLTGHGIRATISTALNELGYPKVWVDAQLSHADPNRISATYNHAEYVEQRRLM MQDWADRLDLFEQNQVQIASTHLTIHLQGVPTIAGQKVTPLPALGQHAPIMLVAPNEQTMPAVGTGTQRLSAVQMPEYAL PKISEVQRERLEVLDIFEGPDNLVVADYAKLAGKSRRWITYEIQARNLLSIQLGNKGQRVPVWQLNMFKRRLVQAVLKRL HRGVDTWDIYYALTRPREELDGKSPIEALTSDNQQAMVEAVCRAVSEATTPVVEKRVPINRIAECMSEF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| int | AAN62094.1 | putative integrase | Not tested | PAGI-2(C) | Protein | 2e-158 | 55 |
| unnamed | AFG30104.1 | Int | Not tested | PAGI-2 | Protein | 6e-149 | 53 |
