Gene Information

Name : Psyr_0963 (Psyr_0963)
Accession : YP_234057.1
Strain : Pseudomonas syringae B728a
Genome accession: NC_007005
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3272
EC number : -
Position : 1097002 - 1097958 bp
Length : 957 bp
Strand : -
Note : -

DNA sequence : 
ATGCCCGCAATCGAAAAACCCAAACTCGGCATCAGTGCCTGCCTGATGGGTGCCGAGGTTCGCTTCAATGGCGGACACAA
GGAATCTCATCTGTGTACGCAGGCGTTGAGCAAGTACTTCGATTTCGTCCAGGCGTGTCCTGAAGTCGCTATCGGCATGG
GCATCCCGCGCGAGCCGATCAGGCTGGTGGGCGACGCAGAAAACCCCAAGGCGCTTGGCACGGTCAATCGTGACCTGGAC
GTTACCCAGGCCTTGGCGGATTACGGCATACAGATGGCCGCTGAGCTGGGCGATATCTGCGGCTACATCTTCATGCAGAA
ATCCCCGTCATGCGGCCTGGAGCGGGTCAAGGTCTACCGCGAAAACGGCGCCCCGGTCGATGGCGGCGGTCGCGGGATCT
ATGCGCAGGCCTTCTGCGAACGTCATCCCGATCTGCCCGTCGAGGAAGACGGCCGACTCAACGATGCCGTGCTGCGCGAA
AACTTCGTCACCCGCGTGTTTGCCTACGCGGCCTGGCAACAGTTGCTGAAAGAAGGCGTCACCCGGCGCGCCCTGACCGA
ATTCCACTCGCGCTACAAATACCAGCTGATGGCCAACGACCCGGTGCAATACAAGGCGTTGGGCAAGATGCTCGGCAGCA
TGGGCCGCACCGACCCGAACGAAATCGCGCCGCTGTACTTCAGCCAATTGATGGCAGCCTTGAAAAAGTGCGCCACGCGC
AGCACTCACACCAACGTCCTGCAGCACCTGTGTGGTTATTTGAAACAAACCATTACCAGTGAAGACAAGCAGGAAATCCA
GCAGGTCATCGCCCAGTATCACCAGGGCATCGTGCCCCTGATCGTGCCGCTGACGCTGCTCAAGCATCATTTTCGCCAAC
ATCCGGACCCGTATGTGGCGCTGCAGGTGTACATGCAGCCCCACCCGGAAAACCTCAGCCTGCGCAATGCGATTTGA

Protein sequence : 
MPAIEKPKLGISACLMGAEVRFNGGHKESHLCTQALSKYFDFVQACPEVAIGMGIPREPIRLVGDAENPKALGTVNRDLD
VTQALADYGIQMAAELGDICGYIFMQKSPSCGLERVKVYRENGAPVDGGGRGIYAQAFCERHPDLPVEEDGRLNDAVLRE
NFVTRVFAYAAWQQLLKEGVTRRALTEFHSRYKYQLMANDPVQYKALGKMLGSMGRTDPNEIAPLYFSQLMAALKKCATR
STHTNVLQHLCGYLKQTITSEDKQEIQQVIAQYHQGIVPLIVPLTLLKHHFRQHPDPYVALQVYMQPHPENLSLRNAI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 3e-60 41
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 5e-60 41
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 7e-60 41
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 6e-60 41
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 6e-60 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psyr_0963 YP_234057.1 hypothetical protein VFG0490 Protein 3e-60 41