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Name : gabD (Psyr_0091) Accession : YP_233203.1 Strain : Pseudomonas syringae B728a Genome accession: NC_007005 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase I Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 99948 - 101390 bp Length : 1443 bp Strand : - Note : catalyzes the formation of succinate from succinate semialdehyde; NADP dependent DNA sequence : ATGCAGCTCAAAGATTCCACACTGTTCCGCCAGCAAGCCTACATCAACGGCCAATGGCTGGACGCGGACGGTGGTCAGTC GATCAAGGTCAACAACCCGGCCAACAATGAAATCCTCGGCACTGTGCCAAAAATGGGCGCAGCCGAGACGCGTCGGGCGA TTGAGGCGGCGGACAAGGCGCTGCCGGCCTGGCGTGCGCTGACCGCCAAGGAGCGTGGCAACAAGCTGCGCCGCTGGTTC GAGCTGATGATCGAGAACCAGGACGATCTGGGTCTGCTGATGACGCTGGAGCAGGGCAAGCCGCTGGCCGAAGCCAAGGG CGAGATCACCTATGCGGCTTCGTTCATCGAGTGGTTCGCCGAAGAAGCCAAGCGCGTGTATGGCGACGTGATTCCTGGTC ACCAGCCGGACAAGCGCCTGATCGTGCTCAAGCAGCCAATTGGTGTGACGGCGGCGATCACCCCGTGGAACTTCCCGGCG GCGATGATCACGCGCAAGGCCGGTCCGGCACTGGCGGCGGGTTGCACCATGGTGCTCAAGCCTGCGTCGCAAACGCCGTT CTCGGCACTGGCACTGGCTGAACTGGCCGAGCGTGCGGGTATCCCGGCGGGCGTGTTCAGCGTGGTGACCGGCAGCGCGG GCGATATCGGTGCCGAGCTGACCGGTAACCCGATCGTGCGCAAACTGTCCTTCACCGGCTCGACCGACATTGGTCGCCAG CTGATGGCCGAGTGCGCCAAGGACATCAAGAAGGTTTCCCTGGAGCTGGGCGGTAACGCGCCTTTCATCGTGTTCGACGA TGCCGACCTCGACAAGGCGGTCGAAGGCGCGATGATCTCCAAGTACCGCAACAACGGCCAGACCTGCGTGTGCGCCAACC GCATCTACGTGCAGGACGCGGTGTATGACGCGTTCGCCGAGAAGCTCAAGGCGGCGGTCGGCAAGCTGAAGATCGGTAAC GGCCTGGAAGAAGGCGTCACCACCGGCCCGTTGATCGACGACAAGGCGGTGGCCAAGGTCAAGGAGCACATCGCCGACGC CGTCAGCAAGGGCGCAACCGTGCTGACCGGTGGCAACAGCCTGGAAGGCTCGTTCTTCGAGCCGACCATTCTGGTCAACG TGTCTAAAGATGCCGCCGTGGCCCGGGAAGAAACCTTTGGCCCGCTGGCCCCGCTGTTCCGCTTCAAGGACGAGGCCGAA GTGATCGCGATGGCCAACGACACCGAGTTCGGTTTGGCGTCGTACTTCTACGCGCAGAACATGAGCCGCGTGTTCCGTGT CGCCGAAGCGCTGGAATATGGCATGGTGGGTATCAACACCGGCCTGATCTCCAACGAACTGGCACCGTTCGGCGGTATCA AGTCGTCCGGCCTGGGCCGTGAAGGCTCCAAGTACGGCATCGAAGATTATCTGGAAATCAAATACCTCTGCCTGTCGGTC TGA Protein sequence : MQLKDSTLFRQQAYINGQWLDADGGQSIKVNNPANNEILGTVPKMGAAETRRAIEAADKALPAWRALTAKERGNKLRRWF ELMIENQDDLGLLMTLEQGKPLAEAKGEITYAASFIEWFAEEAKRVYGDVIPGHQPDKRLIVLKQPIGVTAAITPWNFPA AMITRKAGPALAAGCTMVLKPASQTPFSALALAELAERAGIPAGVFSVVTGSAGDIGAELTGNPIVRKLSFTGSTDIGRQ LMAECAKDIKKVSLELGGNAPFIVFDDADLDKAVEGAMISKYRNNGQTCVCANRIYVQDAVYDAFAEKLKAAVGKLKIGN GLEEGVTTGPLIDDKAVAKVKEHIADAVSKGATVLTGGNSLEGSFFEPTILVNVSKDAAVAREETFGPLAPLFRFKDEAE VIAMANDTEFGLASYFYAQNMSRVFRVAEALEYGMVGINTGLISNELAPFGGIKSSGLGREGSKYGIEDYLEIKYLCLSV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 7e-159 | 67 |
