|
Name : Psyr_0081 (Psyr_0081) Accession : YP_233193.1 Strain : Pseudomonas syringae B728a Genome accession: NC_007005 Putative virulence/resistance : Virulence Product : ABC transporter Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1118 EC number : - Position : 87481 - 88461 bp Length : 981 bp Strand : - Note : - DNA sequence : ATGTCGATCGAAGTCCGTAACGTCAGCAAGAACTTCAATGCCTTCAAGGCCCTGAACAACATCAGTCTGGACATCCAGAG TGGCGAGCTGGTGGCTTTGCTGGGCCCGTCAGGCTGTGGCAAGACCACCCTGCTGCGCATCATTGCCGGCCTGGAAACCC CGGATGACGGCAGCATCGTGTTCCATGGCGAAGATGTGTCCGGCCACGACGTGCGTGATCGCAACGTCGGGTTCGTGTTC CAGCACTACGCGCTGTTCCGCCACATGACGGTGTTCGACAACGTCGCGTTCGGCCTGCGCATGAAGCCCAAGCGCGAGCG CCCGAACGAAACGCGGATCGCCGAGAAGGTCCATGAGCTGCTGAACATGGTGCAGCTGGACTGGCTGGCCGACCGTTATC CGGAGCAACTGTCGGGTGGACAGCGCCAGCGAATCGCCCTGGCCCGCGCCCTGGCGGTCGAGCCCAAGGTGCTGCTGCTG GACGAGCCGTTCGGCGCGCTGGACGCCAAGGTCCGCAAGGAGCTGCGTCGCTGGCTGGCGCGCCTGCACGAAGACATCAA CCTGACCTCGGTGTTCGTGACTCACGATCAGGAAGAGGCCATGGAAGTGGCTGACCGCATCGTGGTGATGAACAAGGGCG TGATCGAACAGATCGGCTCGCCGGGCGAGGTCTACGAGAACCCGTCCAACGACTTCGTCTACCACTTCCTCGGCGACTCC AATCGCCTGAGCCTGGGCGCGGAGGGTCACCTGCTGTTCCGTCCGCATGAGGTGTCGCTGTCCCGCCAGGAAATCGAAGA CCACCACGCCGCCGAAGTCCGCGACATCCGCCCGCTGGGCGCGACGACGCGGGTCACGTTGAAAGTGGAAGGGCAGGACG AACTGATCGAGGCCGAAGTGGTGAAAGACCACGACAGCCTGGTGGGCCTGGCGAAGGGCGAAACGCTGTTCTTCAAACCG AAGGTCTGGCAGAAGCTTTAA Protein sequence : MSIEVRNVSKNFNAFKALNNISLDIQSGELVALLGPSGCGKTTLLRIIAGLETPDDGSIVFHGEDVSGHDVRDRNVGFVF QHYALFRHMTVFDNVAFGLRMKPKRERPNETRIAEKVHELLNMVQLDWLADRYPEQLSGGQRQRIALARALAVEPKVLLL DEPFGALDAKVRKELRRWLARLHEDINLTSVFVTHDQEEAMEVADRIVVMNKGVIEQIGSPGEVYENPSNDFVYHFLGDS NRLSLGAEGHLLFRPHEVSLSRQEIEDHHAAEVRDIRPLGATTRVTLKVEGQDELIEAEVVKDHDSLVGLAKGETLFFKP KVWQKL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| opuBA | YP_005124363.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 3e-34 | 43 |
| opuBA | NP_938494.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 2e-34 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Psyr_0081 | YP_233193.1 | ABC transporter | VFG0344 | Protein | 2e-32 | 42 |
