Gene Information

Name : hemC (Psyr_0062)
Accession : YP_233174.1
Strain : Pseudomonas syringae B728a
Genome accession: NC_007005
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 61471 - 62412 bp
Length : 942 bp
Strand : -
Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis

DNA sequence :
ATGTCCTCTCGCGAAATCCGCATCGCCACTCGCAAAAGCGCGTTGGCACTCTGGCAGGCAGAATACGTCAAGGCCCGCCT
GGAACAGGCCCACCCCGGCCTGCTCGTGACGTTGGTGCCCATGGTCAGCCGTGGCGACAAACTGCTCGACTCCCCGCTGT
CGAAAATCGGTGGCAAAGGGCTGTTCGTCAAGGAGCTGGAAACCGCGCTTCTGGAAAACAACGCCGACATCGCCGTGCAT
TCGATGAAAGACGTGCCGATGGATTTTCCACAAGGCCTGGGCCTGTTCTGCATCTGCGAGCGTGAAGACCCGCGCGATGC
ATTCGTCTCCAACACCTTTGCCAGCCTGGACCAGTTACCGGCGGGCAGCATTGTCGGCACCTCCAGCCTGCGCCGTCAGG
CCCAATTGCTGGCGCGTCGACCCGACCTGCAGATCCGTTTCCTGCGCGGCAACGTCAATACCCGTCTGGCCAAGCTCGAT
GCCGGTGAGTACGACGCCATCATCCTCGCCGCCGCCGGCCTGATCCGCCTGGGTTTCGAAGACCGCATCACCTCGGCAAT
CAGCGTCGATGACAGCCTGCCAGCCGGTGGCCAGGGCGCGGTGGGTATCGAATGCCGCAGCGTCGACGCCGAAATTCATG
CGCTGCTTGCCCCTCTGCACCACGAAGACACCGCCGTGCGCGTGATTGCCGAACGTTCGCTGAACAAGCACCTCAACGGT
GGCTGCCAGGTGCCGATTGCCTGCTACGCCGTGCTGGAAGGCGATGACGTCTGGTTGCGCGGCCTGGTGGGTGATCCGTC
CGGCAGCGTGTTGCTGCATGCAGATGCCCGGGCGCCCCAGACCTCCGCCCAGGCGTTGGGTGTGCAGGTGGCCGAAGCGC
TGCTGGAGCAGGGCGCCGCCGACATCCTGAAAGCGGTCTACGGCGAGGCCAATAACGAATGA

Protein sequence :
MSSREIRIATRKSALALWQAEYVKARLEQAHPGLLVTLVPMVSRGDKLLDSPLSKIGGKGLFVKELETALLENNADIAVH
SMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDQLPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLD
AGEYDAIILAAAGLIRLGFEDRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHLNG
GCQVPIACYAVLEGDDVWLRGLVGDPSGSVLLHADARAPQTSAQALGVQVAEALLEQGAADILKAVYGEANNE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 3e-72 60
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 3e-72 60