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Name : Psyr_0586 (Psyr_0586) Accession : YP_233694.1 Strain : Pseudomonas syringae B728a Genome accession: NC_007005 Putative virulence/resistance : Virulence Product : YD repeat-containing protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG3209 EC number : - Position : 667245 - 670115 bp Length : 2871 bp Strand : - Note : - DNA sequence : ATGCCTGATGCCCTGCACCGACATACCCCCACGCTTATGGTGACTGATAACCGGGGGCTGCCAATCCGCAGTGTGAGTTA TTACCGCGGCACACCGGGTGATAGTTCGCAGGCGCGCCCGGAACGCCAGCAGTATGATGCAGCGGCAAGACCCGTTGCCA GATGGGACGCCAGGCTATTCAGGCAATTGGCCACCGAGCCATTCACTCGCCCGAACCTGAGCACGGTATTCAGCCTCACC GGCGCGCCCTTGGCGGTAAACAGTGTCGACGCAGGCTGCCGGGTTTCCCTCTATGGCGAGGCGGGTCAGTTGCTGGAACA CCATGACGCACGCGGTACCCACTGGACAACCCGCTACGACGAACTGCTTCGCCCCTTGGCGATCAACGAAAAGCCCCGGG GCCACCCCTGCCGAACATCAGAACGTTTCTCATATGCCGATAGTTCAGAGCTGGCCGCTGCCAACAATGTCTGCGGCCGC CTGATTCAGACTTACGACGGATCGGGTAGCGATCTTATCGATGCCTGTGGCGTATCAGGGCAGATTCTCCAGCAGACCCG ACGCTTTCTGCAGAAGAACGATCTACCGAACTGGCCTGCAGACGCTCTGCATCAGGATGAGTTGCTGGAGCCCGGCCCGG GTTTCTCAAGCAAAGCACGCTTCAACGCTATGGGCGAGGTACTTGACCAAACCGATGCATCAGGCAATCGTCATACGTCG ACCTATGACGTGTCGGGCCAGTTGAAGGCTACCCGCCTGAGGGTGATGAACGGGAGCGATCAGGTACTGCTGCATGGATT GATGTACGACGCGCATGGCCGTATCGAGTCGCAAACAGCCGGTAACGGAGTCATCAGCTGCGCAAGCTTTGATCTTGCCG ATGGTCGCATGAGTGAGCTAATCACCTACCGTCCGGGAGTCAAGCAACTGCAGCACCTGCTGTACGACTACGACCCAGTG GGAAATGTAACCAGGATTCGGGACGAGGCACAGCCCGCACGCCACTGTTCAGGCCAGCGCATTGATGCCGTCAATGAATA CGAATATGACAGCCTTTACCAGTTAATCAGGGCCAGCGGTCGCGAAACCGCCCTGGCGGGGATTCGCCCTGAATTACCGG AGCTCGCCCGGCTACCAGTGGATGAAAGTCAGCTACTCAATTACAACCAACGTTATTCCTACGACGATGCGGGCAATCTC TTAAAGCTCATTCACAAGGGTGCGCAAGCGTACACACGTCACATGATCGTCGATACCAAAAGCAACCGGGCCTTGCCCTG GAGCGAGGGTGACGCGCCACCAGACTTCGATAAACAATTCGACGCCAATGGCAATCAGCAAGCGCTGGTTGCGGGACGAG CGCTGCACTGGGACTCGGGAAACCGCCTGATCAAGGTGGATGCCGTTACTCGTTCCGAGCAACCAGAAGACGGCGAACAC TACGCTTACGACGCTAGCGGCCAGCGCCTGCGTAAAACAGCGAAGGCCATGACCCGGACATTCCAGCACCAATGCGACGT GCGCTATTTGCCAGGCCTGGAAATCCGTACAAACAGTGCAACCGGCGAGCGACTGGAAGTCATCACAGTGTACGCCGGAC GGACTAACGTGCGCTGCCTGCACTGGCGAGAGGGCAAACCGGATGCGATAGACAATAATCAGCTCCGCTACAGCATCGGT GACCACCTGGGCTCAAGCACACTTGAGCTGGATGCCCAGGCAAAGCTGATCAGCCATGAAGGGTATTACCCGTTCGGAGG GACCGCATGGTGGGCTGCGCGCTCGGCTGTTGAAGCGTCCTATAAAGTCATCCGCTACTCTGGCAAGGAGCGGGACAGCA CGGGTCTTTATTACTACGGCGTGAGGTATTACGCGCCTTGGCTGATGCGCTGGATGAGTGCAGACCCGCTAGGCGATGTA GAGGGGCTGAACCTTTACCGAATGACCAGAAACAACCCCGTCAGCAGAGTCGACCCAGAGGGTGGCCAGAGCATTGATTT TGACGGCATGACGCTCATTTCCATAGGCATTACTATTGGGGTAGTCGCTATGGGACTGACCACCTGGGCACTTCTAGCCT ACACCTCGTGGACCCGGAAAAACGCCAAACTAAAGGACTATAGGGCTTTTTCTGATAGTGCGGCCAGTGAGTTTGGGCTT GACAGCAATGAGATTAAAGAACTTCACGGCTTCATGAGCAGCGTCAACGCGAGACCCAGGGATATATTTTTTCGGCACGA CGACCCGACTGGATCGGTACATGCGTATTACCTCCCCAAATCAGTCCAGCAAGACTTTTTCAAAAAACACAGCAAATCGC CTGAATTCTTAAGCCAGTCAACGAAACTCATCCACATGGAGCTTAGGGCCGCAGAGTATCCTGACCTGTCCCGCCGCGCG AGCAATGTGAGCAATGTGAGCACCTTAAGCAACGTGAGCAACCGGACATCTATTACTGAGACATCAGAACCCACCGTATC TCCTGAAGATAAAAAGCGTTATCGCGACTCTGCAGGAACAAGTACATCCACGCCTGAAGCCCCCAGTCTTAATGCCCCAG TAAAAAAGAAGCGAGCGACAACATTCGCCAAGGTTGCTATCGGCGACTTTTTTAACTCCACAGTGTTCGAGGATGCTAAA AACACATTTGGAGAGGATGAAGTGACATCAGCCGTCACCAAGGCGATCGACAGTTTCAATGAGCGAGGTTTTAACGGCGC CTCAGCACACAAGTTAAGGACAGGAGAAATCTCTCTGGACCTTCTCGGGTTAGGCGGCGCCACAGGCAGAGGCAGAATGC GGTTGCTACTGGCAAAAAACAAAAAAACAGGGCGATTGTATCCAACCCGAATCACGGATACGCACCGATAG Protein sequence : MPDALHRHTPTLMVTDNRGLPIRSVSYYRGTPGDSSQARPERQQYDAAARPVARWDARLFRQLATEPFTRPNLSTVFSLT GAPLAVNSVDAGCRVSLYGEAGQLLEHHDARGTHWTTRYDELLRPLAINEKPRGHPCRTSERFSYADSSELAAANNVCGR LIQTYDGSGSDLIDACGVSGQILQQTRRFLQKNDLPNWPADALHQDELLEPGPGFSSKARFNAMGEVLDQTDASGNRHTS TYDVSGQLKATRLRVMNGSDQVLLHGLMYDAHGRIESQTAGNGVISCASFDLADGRMSELITYRPGVKQLQHLLYDYDPV GNVTRIRDEAQPARHCSGQRIDAVNEYEYDSLYQLIRASGRETALAGIRPELPELARLPVDESQLLNYNQRYSYDDAGNL LKLIHKGAQAYTRHMIVDTKSNRALPWSEGDAPPDFDKQFDANGNQQALVAGRALHWDSGNRLIKVDAVTRSEQPEDGEH YAYDASGQRLRKTAKAMTRTFQHQCDVRYLPGLEIRTNSATGERLEVITVYAGRTNVRCLHWREGKPDAIDNNQLRYSIG DHLGSSTLELDAQAKLISHEGYYPFGGTAWWAARSAVEASYKVIRYSGKERDSTGLYYYGVRYYAPWLMRWMSADPLGDV EGLNLYRMTRNNPVSRVDPEGGQSIDFDGMTLISIGITIGVVAMGLTTWALLAYTSWTRKNAKLKDYRAFSDSAASEFGL DSNEIKELHGFMSSVNARPRDIFFRHDDPTGSVHAYYLPKSVQQDFFKKHSKSPEFLSQSTKLIHMELRAAEYPDLSRRA SNVSNVSTLSNVSNRTSITETSEPTVSPEDKKRYRDSAGTSTSTPEAPSLNAPVKKKRATTFAKVAIGDFFNSTVFEDAK NTFGEDEVTSAVTKAIDSFNERGFNGASAHKLRTGEISLDLLGLGGATGRGRMRLLLAKNKKTGRLYPTRITDTHR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| TccC5 | AAO17210.1 | TccC5 | Virulence | tcd island | Protein | 6e-100 | 41 |
| TccC4 | AAO17196.1 | TccC4 | Virulence | tcd island | Protein | 2e-106 | 41 |
