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Name : Psyr_0544 (Psyr_0544) Accession : YP_233652.1 Strain : Pseudomonas syringae B728a Genome accession: NC_007005 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 615173 - 617062 bp Length : 1890 bp Strand : + Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGAGTATAAAAGCAAAAAACGCAGCCCATTTGCGCGAGTCGGCGCAGGTCGATTCCGGATCGGTACAGCCGTTTACCCG TTCGCAGAAAATCTACGTTCAGGGCTCGCGCCCGGACATCCGCGTGCCGATGCGCGAAATCACCCTGGATGTCACCCCGA CTGACTTTGGCGGCGAGATCAACGCCCCGGTCACGGTCTATGACACCTCGGGGCCCTACACCGACCCCAATGTGATCATC GACGTGCGCAAAGGCCTGGCTGACGTGCGCTCGCCATGGATCGACTCGCGCAATGACACCGAGCGTCTGCCGGGCCTGAG TTCCAACTTCGGCCAGCAACGCCTGAGCGATGCCGAGCTCACCGCGCTGCGCTTTGCCCATGTGCGCAACCCGCGCCGGG CCAAGGCCGGTGCCAACGTCAGCCAGATGCACTATGCGCGTCAGGGCATCATTACCGCCGAGATGGAATACGTCGCCATC CGCGAGAACATGAAGCTTCAGGAAGCCCGCGCCGCAGGTCTGCTGACCCAGCAACATGCCGGGCACAGCTTTGGCGCGAG TATTCCGAAGGAAATCACTGCCGAGTTCGTGCGTGAAGAGATTGCCCGGGGCCGCGCGATCATCCCGGCCAACATCAACC ACGTCGAGCTTGAGCCGATGATCATCGGCCGCAACTTCCTGGTGAAGATCAACGGCAACATCGGCAACAGCGCACTGGGC TCTTCCATTGAAGAAGAGGTCGCCAAGCTGACCTGGGGTATCCGCTGGGGCTCGGACACGGTCATGGACCTGTCCACCGG CAAGCACATTCACGAAACCCGTGAGTGGATCATCCGCAATTCGCCGGTGCCGATCGGTACGGTGCCGATCTATCAGGCGC TGGAAAAAGTGGGGGGTGCAGCCGAGGACCTGACCTGGGAGCTGTTCCGCGACACGCTGATCGAGCAGGCCGAGCAGGGC GTCGATTACTTCACCATCCACGCCGGAGTGCTGCTGCGTTACGTGCCGCTGACCGCCAAGCGTGTCACCGGTATCGTCAG CCGTGGCGGTTCGATCATGGCCAAATGGTGCCTGGCGCACCACAAGGAAAACTTCCTTTACACCCATTTCGAAGACATCT GCGAAATCATGAAGGCCTACGACGTCAGCTTCTCGCTGGGCGACGGCCTGCGTCCGGGCTCGATTGCCGACGCCAACGAT GCGGCGCAGTTCGGCGAACTGGAAACGCTTGGCGAACTGACCAAGATTGCCTGGAAACATGACGTGCAGACCATGATCGA AGGCCCCGGCCATGTGCCGATGCAGTTGATCAAGGAAAACATGGACAAGCAGCTGGAATGCTGCGACGAAGCGCCGTTCT ACACCCTGGGCCCGCTGACCACCGACATCGCGCCGGGTTACGACCACATCACCTCGGGCATCGGCGCGGCCATGATCGGC TGGTTCGGCTGCGCCATGCTGTGTTACGTCACGCCCAAGGAGCATCTGGGGCTGCCGAACAAGGATGACGTCAAAACCGG GATCATCACCTACAAGATCGCGGCCCATGCGGCGGACCTTGCCAAAGGCCACCCGGGTGCGCAGATCCGTGACAACGCGT TGAGCAAGGCGCGTTTCGAGTTCCGCTGGGAAGACCAGTTCAACCTCGGCCTGGACCCGGACACCGCGCGTTCGTACCAC GACGAAACCCTGCCCAAGGATTCGGCCAAGGTCGCGCACTTCTGCTCCATGTGCGGGCCGAAATTCTGCTCGATGAAGAT CACTCAGGAAGTCCGCGAGTACGCCGCCAACCAGCGCATCGAGGCGGTAGACGTCGATGTCGCCAAGGGCCTGGCCGAAC AGGCCGAGCGCTTCAAGCAGGAGGGTAGTCAGCTGTACAAGAAGGTGTAA Protein sequence : MSIKAKNAAHLRESAQVDSGSVQPFTRSQKIYVQGSRPDIRVPMREITLDVTPTDFGGEINAPVTVYDTSGPYTDPNVII DVRKGLADVRSPWIDSRNDTERLPGLSSNFGQQRLSDAELTALRFAHVRNPRRAKAGANVSQMHYARQGIITAEMEYVAI RENMKLQEARAAGLLTQQHAGHSFGASIPKEITAEFVREEIARGRAIIPANINHVELEPMIIGRNFLVKINGNIGNSALG SSIEEEVAKLTWGIRWGSDTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVGGAAEDLTWELFRDTLIEQAEQG VDYFTIHAGVLLRYVPLTAKRVTGIVSRGGSIMAKWCLAHHKENFLYTHFEDICEIMKAYDVSFSLGDGLRPGSIADAND AAQFGELETLGELTKIAWKHDVQTMIEGPGHVPMQLIKENMDKQLECCDEAPFYTLGPLTTDIAPGYDHITSGIGAAMIG WFGCAMLCYVTPKEHLGLPNKDDVKTGIITYKIAAHAADLAKGHPGAQIRDNALSKARFEFRWEDQFNLGLDPDTARSYH DETLPKDSAKVAHFCSMCGPKFCSMKITQEVREYAANQRIEAVDVDVAKGLAEQAERFKQEGSQLYKKV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 78 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 78 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 72 |
