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Name : Psyr_4958 (Psyr_4958) Accession : YP_238023.1 Strain : Pseudomonas syringae B728a Genome accession: NC_007005 Putative virulence/resistance : Virulence Product : ATPase AAA Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 5876740 - 5879343 bp Length : 2604 bp Strand : + Note : - DNA sequence : GTGAACCTGAAGTCCCTGTTCGCCAAGCTGAACGAAACGAGCCGCACTGCCACTGAAAGCGCTGCTGCGCTGTGCCTGTC GGAGAACCATTACGACGTTGAAGTCGAGCACTTGCTGCTGCAACTGCTCGATAACAACGACAACGATCTGCCAGTGATCC TGCGCCACTACGATGTGGTGCCTGATCGCCTGCAGGCACAGTTGGTCACTGCGCTGGGGACGTTCAAGAAAGGCAACACG CGGACGCCTGCGCTCTCGCCGCACATCACGCGCATGATCGAGCAGGCTTGGGTGCTGGCATCGATCGAGTTCGGTCAGTC ACAGATCCGTACCGGCCATCTTGTGCAGGCCTTGCTGGATGACGATGCACTGCGTCGCGTGGTCATCGGCTCGGCGCCGG AGCTGGAGAAGATCAACGCTGACGACCTGCGCCTGAACATGAGCGCGCTGGTCGAGGGCAGCCCCGAGACCAAGCTGAGC AAGCCACTGGCGAACGCCGACGCCAGCACGGGCGCCACCACCAAAGGTAACGGCAAGACGCCAGCCCTGGACCAGTACAC CGTCAACCTGACCCAGAGCGCTCGCGATGGTCGCATTGACCCGGTGCTGGGACGCGAATTCGAAGTGCGGCAGATGGTCG ACATCCTGACCCGCCGCCGCCAGAACAACCCGATCCTGACCGGTGAAGCCGGCGTCGGTAAAACAGCCGTGGTGGAAGGC CTGGCGCTGCGCATTGTGCAGGGCGACGTGCCGTCGGTGCTCAAGGGCGTTGCCATTCACACGCTGGATCTGGGCCTGTT GCAGGCCGGTGCCGGGGTCAAGGGCGAGTTCGAAAACCGCCTCAAGTCGGTCATCGAAGAAACCAAACGCAGCCTGCACC CGATCATTCTGTTTATCGATGAAGCCCACACGCTGATCGGTTCGGGCGGGCAAGCCGGGCAGAACGATGCCGCCAACCTG CTCAAGCCTGCCTTGGCACGCGGTGAGCTGCGCACCATCGCCGCCACAACCTGGGCCGAGTACAAAAAGTATTTCGAGAA GGATGCCGCACTGGCTCGACGCTTCCAGGTGGTGAAAGTCGAAGAGCCTGACGAAGACAAGGCCATCCACATGCTTCGCG GGTTGCTGGCGAAGATGCAGGAACACCACAAGGTCACGGTGATGGATGAAGCGCTGGTGCAGGCCGTGCGCCTGTCCAAC CGCTACATCACCGGCCGCCAGTTGCCGGACAAGGCAGTCAGCGTACTCGACACCGCTTGCGCACGCGTTGCCCTGGGCCA GTCGGCACAGCCGGGAGCGCTGGAGGACTGCAAGCGTCACATCGACAACCTGAACGCGGAAATCACCGTACTGGAGCAGG AAACCGCCAAGGGCAGCGACCACGCTCGGCGTCTGACGGCCCTGCACGAAGAGCTGCAGGCCGAACAGGAGACCCGCGAG TCGCTGGAGCAACAGTGGAAGCGCGAGCTGGAGCTGGTCGAGAAGCTTGGCGCACTCAGCGTTCCGCAAAGCGGCGAGCC TGATGCCGGGCAGATTGCCGCCGTACGCGCCGAACTAGCCAGCGTGCAGGGCGAGCAACCGCTGGTCCACGCACTGGTCG ATGGCGGCACGATTGGCGAAGTGATTTCCGGCTGGACCGGCATTCCGCTGGGCAAGATGCTGCGCGACGAAATCGACACC GTGCAGAGCCTGCCCGCGCTGCTGGGCGAACGCGTACTGGGTCAGGACCATGCACTCGAAGAAATCGGCAAGCGCATCAA GATTTCCCGTGCCCGCATGGAAGACCCGAACAAGCCGATCGGCGTGTTCCTGCTGCTGGGCCCGAGCGGCGTCGGCAAGA CCGAAACGGCACTGGCCCTGGCTGACACGCTGTATGGCGGCGAACGTAACGTCATCACCATCAACATGTCCGAATACCAG GAAGCCCACACCGTCTCCAGCCTGAAAGGCTCACCGCCTGGCTACGTCGGTTACGGCGAAGGTGGCGTGCTCACCGAAGC CGTACGCCGCAAGCCTTATAGCGTGGTGCTGCTCGACGAGGTGGAGAAAGCCCACCCGGATGTGCTCGAGCTGTTTTTCC AGGTCTTCGACAAAGGCGTGCTGGACGATGGCGAAGGTCGCGAGATCAACTTCCGCAACACCGTGATCATCCTCACCTCC AACACCGGCACTGATCGCATCATGCAGTGGTGCCTGAACACAGAGCAGAAGCCGACCCCCGATGACATCGTGGAAGGCCT GCGCGACGAGCTGAATCAGGTGTTCAAACCGGCCTTCCTGGGTCGCCTGACCATCGTGCCGTATTACCCGGTACAGGACG CGATTCTGGAGCGCATCGTCGGCCTGAAGCTGGAGCGCATTCGCAAGCGTTTCGAGCGCAATCATCAGGCGGTGCTGCGT TACGACGAAGCACTGATAAAGGCTATCGCGTCGCGCTGCACGGAAGTCGACAGCGGCGCGCGCAATATCGACAACATCCT GTCCAAGACCCTCATGCCGGAGCTCGCTCAGCGGGTACTGGAGCGGATGGCGCAGGACAAGCCGATTCAGAGCCTGACCA TCGACCTGGGCAGCGATGGCGACTTCGCTTACACCCTGACCTGA Protein sequence : MNLKSLFAKLNETSRTATESAAALCLSENHYDVEVEHLLLQLLDNNDNDLPVILRHYDVVPDRLQAQLVTALGTFKKGNT RTPALSPHITRMIEQAWVLASIEFGQSQIRTGHLVQALLDDDALRRVVIGSAPELEKINADDLRLNMSALVEGSPETKLS KPLANADASTGATTKGNGKTPALDQYTVNLTQSARDGRIDPVLGREFEVRQMVDILTRRRQNNPILTGEAGVGKTAVVEG LALRIVQGDVPSVLKGVAIHTLDLGLLQAGAGVKGEFENRLKSVIEETKRSLHPIILFIDEAHTLIGSGGQAGQNDAANL LKPALARGELRTIAATTWAEYKKYFEKDAALARRFQVVKVEEPDEDKAIHMLRGLLAKMQEHHKVTVMDEALVQAVRLSN RYITGRQLPDKAVSVLDTACARVALGQSAQPGALEDCKRHIDNLNAEITVLEQETAKGSDHARRLTALHEELQAEQETRE SLEQQWKRELELVEKLGALSVPQSGEPDAGQIAAVRAELASVQGEQPLVHALVDGGTIGEVISGWTGIPLGKMLRDEIDT VQSLPALLGERVLGQDHALEEIGKRIKISRARMEDPNKPIGVFLLLGPSGVGKTETALALADTLYGGERNVITINMSEYQ EAHTVSSLKGSPPGYVGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVLELFFQVFDKGVLDDGEGREINFRNTVIILTS NTGTDRIMQWCLNTEQKPTPDDIVEGLRDELNQVFKPAFLGRLTIVPYYPVQDAILERIVGLKLERIRKRFERNHQAVLR YDEALIKAIASRCTEVDSGARNIDNILSKTLMPELAQRVLERMAQDKPIQSLTIDLGSDGDFAYTLT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 2e-176 | 47 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 1e-141 | 43 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 1e-141 | 43 |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 3e-102 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Psyr_4958 | YP_238023.1 | ATPase AAA | VFG2076 | Protein | 0.0 | 52 |
| Psyr_4958 | YP_238023.1 | ATPase AAA | VFG2084 | Protein | 6e-161 | 45 |
| Psyr_4958 | YP_238023.1 | ATPase AAA | VFG0079 | Protein | 5e-112 | 41 |
