Gene Information

Name : Psyr_4838 (Psyr_4838)
Accession : YP_237903.1
Strain : Pseudomonas syringae B728a
Genome accession: NC_007005
Putative virulence/resistance : Resistance
Product : regulatory protein, MerR
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 5743715 - 5744161 bp
Length : 447 bp
Strand : +
Note : -

DNA sequence :
ATGAAAATCGGCGAACTGGCAAAACTGACCGACACCCAGGTCGAAACCATCCGTTATTACGAACGCGAAGGCCTGCTGCC
CGCGCCCGCCCGCAGCGATGGCAACTACCGGCTGTACACCCAGGCACACACGGAGCGCCTGTCGTTCATCCGCAATTGCC
GCAGCCTGGACATGACCCTTGGAGAAATCCGCAGCCTGCTCAACCTGCGCGACAGCCCGCAGGACCAGTGCGAAAACGTC
AACGCCCTGATCGACGAACACATCGAACACGTCAACGCCCGCGTCGCAAGCCTGCAAGCACTCCAGGAACAACTGCTCGA
CCTGCGCCGCCGCTGCAGCGATGGCACGACAGAACATTGCGCGATACTGGAAAGGCTGGAAGTGACGGGCGCTGTGGCAG
CGCCAGAGGGCGAGCCTTCACATGTGGGGAGGAGTCATGGGCATTGA

Protein sequence :
MKIGELAKLTDTQVETIRYYEREGLLPAPARSDGNYRLYTQAHTERLSFIRNCRSLDMTLGEIRSLLNLRDSPQDQCENV
NALIDEHIEHVNARVASLQALQEQLLDLRRRCSDGTTEHCAILERLEVTGAVAAPEGEPSHVGRSHGH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C98 AAN62191.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 7e-34 56
ACICU_00234 YP_001844893.1 transcriptional regulator Not tested AbaR20 Protein 1e-32 50
cadR ACN81029.1 MerR family transcriptional regulator Not tested AbaR5 Protein 1e-32 50
pbrR CAJ77094.1 Transcriptional regulator Not tested AbaR1 Protein 8e-33 50
cadR AGK36653.1 MerR family transcriptional regulator Not tested AbaR26 Protein 8e-33 50
cadR ACS32041.1 MerR family transcriptional regulator Not tested AbaR5 Protein 3e-32 49
cadR ADZ05769.1 MerR family transcriptional regulator Not tested AbaR11 Protein 2e-32 49
pbrR CAJ77021.1 transcription regulator Not tested AbaR1 Protein 2e-32 49

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psyr_4838 YP_237903.1 regulatory protein, MerR BAC0058 Protein 1e-51 77
Psyr_4838 YP_237903.1 regulatory protein, MerR BAC0301 Protein 2e-30 55